Gene : Cre12.g551900 C. reinhardtii v5.6
Defline:  (1 of 1) KOG3377 - Uncharacterized conserved protein Genomic Order:  1463
Name:  ? Cre12.g551900 Secondary Identifier:  ? PAC:30792387
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre12.g551900 0.5kb upstream 0.5kb upstream 2542 true chromosome_12: 8004077-8006618 Chlamydomonas reinhardtii
Cre12.g551900 0.5kb upstream 0.5kb upstream 500 false chromosome_12: 8006119-8006618 Chlamydomonas reinhardtii
Cre12.g551900 0.5kb downstream 0.5kb downstream 2542 true chromosome_12: 8003577-8006118 Chlamydomonas reinhardtii
Cre12.g551900 0.5kb downstream 0.5kb downstream 500 false chromosome_12: 8003577-8004076 Chlamydomonas reinhardtii
Cre12.g551900 1.0kb upstream 1.0kb upstream 3042 true chromosome_12: 8004077-8007118 Chlamydomonas reinhardtii
Cre12.g551900 1.0kb upstream 1.0kb upstream 1000 false chromosome_12: 8006119-8007118 Chlamydomonas reinhardtii
Cre12.g551900 1.0kb downstream 1.0kb downstream 3042 true chromosome_12: 8003077-8006118 Chlamydomonas reinhardtii
Cre12.g551900 1.0kb downstream 1.0kb downstream 1000 false chromosome_12: 8003077-8004076 Chlamydomonas reinhardtii
Cre12.g551900 2.0kb upstream 2.0kb upstream 4042 true chromosome_12: 8004077-8008118 Chlamydomonas reinhardtii
Cre12.g551900 2.0kb upstream 2.0kb upstream 2000 false chromosome_12: 8006119-8008118 Chlamydomonas reinhardtii
Cre12.g551900 2.0kb downstream 2.0kb downstream 4042 true chromosome_12: 8002077-8006118 Chlamydomonas reinhardtii
Cre12.g551900 2.0kb downstream 2.0kb downstream 2000 false chromosome_12: 8002077-8004076 Chlamydomonas reinhardtii
Cre12.g551900 5.0kb upstream 5.0kb upstream 7042 true chromosome_12: 8004077-8011118 Chlamydomonas reinhardtii
Cre12.g551900 5.0kb upstream 5.0kb upstream 5000 false chromosome_12: 8006119-8011118 Chlamydomonas reinhardtii
Cre12.g551900 5.0kb downstream 5.0kb downstream 7042 true chromosome_12: 7999077-8006118 Chlamydomonas reinhardtii
Cre12.g551900 5.0kb downstream 5.0kb downstream 5000 false chromosome_12: 7999077-8004076 Chlamydomonas reinhardtii
Cre12.g551900 10.0kb upstream 10.0kb upstream 12042 true chromosome_12: 8004077-8016118 Chlamydomonas reinhardtii
Cre12.g551900 10.0kb upstream 10.0kb upstream 10000 false chromosome_12: 8006119-8016118 Chlamydomonas reinhardtii
Cre12.g551900 10.0kb downstream 10.0kb downstream 12042 true chromosome_12: 7994077-8006118 Chlamydomonas reinhardtii
Cre12.g551900 10.0kb downstream 10.0kb downstream 10000 false chromosome_12: 7994077-8004076 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124108735 5260 Chlorophyte View MSA
123425243 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.894     High  
cufflinks 18.558     High  
cufflinks 21.751     High High
cufflinks 16.872     High  
cufflinks 21.769     High High
cufflinks 20.62     High  
cufflinks 14.59     High  
cufflinks 13.723        
cufflinks 11.511     High  
cufflinks 7.819     High  
cufflinks 13.241        
cufflinks 12.296        
cufflinks 14.393     High  
cufflinks 20.199     High  
cufflinks 9.873        
cufflinks 13.88     High  
cufflinks 9.273        
cufflinks 19.942     High  
cufflinks 1.252       Low
cufflinks 6.634        
cufflinks 11.244        
cufflinks 7.266        
cufflinks 5.216       Low
cufflinks 11.369        
cufflinks 8.411        
cufflinks 25.2399 3.09367 47.3861   Low
cufflinks 40.6104 10.979 70.2418 High  
cufflinks 32.555 0.0 65.4336 High  
cufflinks 22.3196 2.96334 41.6759 High Low
cufflinks 33.7143 6.43374 60.9949 High  

0 Strain