Gene : Cre12.g552700 C. reinhardtii v5.6
Defline:  (1 of 20) PTHR19862:SF14 - WD REPEAT-CONTAINING PROTEIN 48 Genomic Order:  1445
Name:  ? Cre12.g552700 Secondary Identifier:  ? PAC:30792194
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre12.g552700 0.5kb upstream 0.5kb upstream 24272 true chromosome_12: 7885579-7909850 Chlamydomonas reinhardtii
Cre12.g552700 0.5kb upstream 0.5kb upstream 500 false chromosome_12: 7885579-7886078 Chlamydomonas reinhardtii
Cre12.g552700 0.5kb downstream 0.5kb downstream 24272 true chromosome_12: 7886079-7910350 Chlamydomonas reinhardtii
Cre12.g552700 0.5kb downstream 0.5kb downstream 500 false chromosome_12: 7909851-7910350 Chlamydomonas reinhardtii
Cre12.g552700 1.0kb upstream 1.0kb upstream 24772 true chromosome_12: 7885079-7909850 Chlamydomonas reinhardtii
Cre12.g552700 1.0kb upstream 1.0kb upstream 1000 false chromosome_12: 7885079-7886078 Chlamydomonas reinhardtii
Cre12.g552700 1.0kb downstream 1.0kb downstream 24772 true chromosome_12: 7886079-7910850 Chlamydomonas reinhardtii
Cre12.g552700 1.0kb downstream 1.0kb downstream 1000 false chromosome_12: 7909851-7910850 Chlamydomonas reinhardtii
Cre12.g552700 2.0kb upstream 2.0kb upstream 25772 true chromosome_12: 7884079-7909850 Chlamydomonas reinhardtii
Cre12.g552700 2.0kb upstream 2.0kb upstream 2000 false chromosome_12: 7884079-7886078 Chlamydomonas reinhardtii
Cre12.g552700 2.0kb downstream 2.0kb downstream 25772 true chromosome_12: 7886079-7911850 Chlamydomonas reinhardtii
Cre12.g552700 2.0kb downstream 2.0kb downstream 2000 false chromosome_12: 7909851-7911850 Chlamydomonas reinhardtii
Cre12.g552700 5.0kb upstream 5.0kb upstream 28772 true chromosome_12: 7881079-7909850 Chlamydomonas reinhardtii
Cre12.g552700 5.0kb upstream 5.0kb upstream 5000 false chromosome_12: 7881079-7886078 Chlamydomonas reinhardtii
Cre12.g552700 5.0kb downstream 5.0kb downstream 28772 true chromosome_12: 7886079-7914850 Chlamydomonas reinhardtii
Cre12.g552700 5.0kb downstream 5.0kb downstream 5000 false chromosome_12: 7909851-7914850 Chlamydomonas reinhardtii
Cre12.g552700 10.0kb upstream 10.0kb upstream 33772 true chromosome_12: 7876079-7909850 Chlamydomonas reinhardtii
Cre12.g552700 10.0kb upstream 10.0kb upstream 10000 false chromosome_12: 7876079-7886078 Chlamydomonas reinhardtii
Cre12.g552700 10.0kb downstream 10.0kb downstream 33772 true chromosome_12: 7886079-7919850 Chlamydomonas reinhardtii
Cre12.g552700 10.0kb downstream 10.0kb downstream 10000 false chromosome_12: 7909851-7919850 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124077259 5260 Chlorophyte View MSA
123395279 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.048     Low Low
cufflinks 0.134     Low  
cufflinks 0.517       High
cufflinks 0.37       High
cufflinks 0.095     Low  
cufflinks 0.17        
cufflinks 0.246        
cufflinks 0.379       High
cufflinks 0.069     Low Low
cufflinks 0.066       Low
cufflinks 0.286        
cufflinks 0.243        
cufflinks 0.465       High
cufflinks 0.176        
cufflinks 0.248        
cufflinks 0.026     Low Low
cufflinks 0.147        
cufflinks 0.42       High
cufflinks 0.075     Low Low
cufflinks 0.092     Low  
cufflinks 0.223        
cufflinks 0.186        
cufflinks 0.175     Low  
cufflinks 0.239        
cufflinks 0.163        
cufflinks 3.66034 0.253893 7.0668 Low Low
cufflinks 1.12256 0.246995 1.99812    
cufflinks 0.22718 0.0 0.561234 Low Low
cufflinks 0.295446 0.015136 0.575756   Low
cufflinks 0.683679 0.0848923 1.28247    

0 Strain