Gene : STA4 C. reinhardtii v5.6
Primary Identifier:  ? Cre12.g552200 Defline:  (1 of 2) 2.4.1.1 - Glycogen phosphorylase / Polyphosphorylase
Genomic Order:  1455 Name:  ? Cre12.g552200
Secondary Identifier:  ? PAC:30792182
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Creinhardtii PWY-7238 Chlamydomonas reinhardtii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre12.g552200 0.5kb upstream 0.5kb upstream 10445 true chromosome_12: 7956582-7967026 Chlamydomonas reinhardtii
Cre12.g552200 0.5kb upstream 0.5kb upstream 500 false chromosome_12: 7966527-7967026 Chlamydomonas reinhardtii
Cre12.g552200 0.5kb downstream 0.5kb downstream 10445 true chromosome_12: 7956082-7966526 Chlamydomonas reinhardtii
Cre12.g552200 0.5kb downstream 0.5kb downstream 500 false chromosome_12: 7956082-7956581 Chlamydomonas reinhardtii
Cre12.g552200 1.0kb upstream 1.0kb upstream 10945 true chromosome_12: 7956582-7967526 Chlamydomonas reinhardtii
Cre12.g552200 1.0kb upstream 1.0kb upstream 1000 false chromosome_12: 7966527-7967526 Chlamydomonas reinhardtii
Cre12.g552200 1.0kb downstream 1.0kb downstream 10945 true chromosome_12: 7955582-7966526 Chlamydomonas reinhardtii
Cre12.g552200 1.0kb downstream 1.0kb downstream 1000 false chromosome_12: 7955582-7956581 Chlamydomonas reinhardtii
Cre12.g552200 2.0kb upstream 2.0kb upstream 11945 true chromosome_12: 7956582-7968526 Chlamydomonas reinhardtii
Cre12.g552200 2.0kb upstream 2.0kb upstream 2000 false chromosome_12: 7966527-7968526 Chlamydomonas reinhardtii
Cre12.g552200 2.0kb downstream 2.0kb downstream 11945 true chromosome_12: 7954582-7966526 Chlamydomonas reinhardtii
Cre12.g552200 2.0kb downstream 2.0kb downstream 2000 false chromosome_12: 7954582-7956581 Chlamydomonas reinhardtii
Cre12.g552200 5.0kb upstream 5.0kb upstream 14945 true chromosome_12: 7956582-7971526 Chlamydomonas reinhardtii
Cre12.g552200 5.0kb upstream 5.0kb upstream 5000 false chromosome_12: 7966527-7971526 Chlamydomonas reinhardtii
Cre12.g552200 5.0kb downstream 5.0kb downstream 14945 true chromosome_12: 7951582-7966526 Chlamydomonas reinhardtii
Cre12.g552200 5.0kb downstream 5.0kb downstream 5000 false chromosome_12: 7951582-7956581 Chlamydomonas reinhardtii
Cre12.g552200 10.0kb upstream 10.0kb upstream 19945 true chromosome_12: 7956582-7976526 Chlamydomonas reinhardtii
Cre12.g552200 10.0kb upstream 10.0kb upstream 10000 false chromosome_12: 7966527-7976526 Chlamydomonas reinhardtii
Cre12.g552200 10.0kb downstream 10.0kb downstream 19945 true chromosome_12: 7946582-7966526 Chlamydomonas reinhardtii
Cre12.g552200 10.0kb downstream 10.0kb downstream 10000 false chromosome_12: 7946582-7956581 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124108804 5260 Chlorophyte View MSA
123425744 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.492        
cufflinks 32.413     High  
cufflinks 29.845     High  
cufflinks 28.897     High  
cufflinks 33.374     High  
cufflinks 24.694     High  
cufflinks 25.599     High  
cufflinks 27.767     High  
cufflinks 8.59        
cufflinks 6.46        
cufflinks 30.392     High  
cufflinks 23.726     High  
cufflinks 14.956     High  
cufflinks 28.473     High  
cufflinks 20.82     High  
cufflinks 11.183        
cufflinks 4.605       Low
cufflinks 26.503     High  
cufflinks 2.445       Low
cufflinks 15.133     High  
cufflinks 21.903     High  
cufflinks 2.266       Low
cufflinks 22.808     High  
cufflinks 29.014     High  
cufflinks 2.377       Low
cufflinks 52.3682 0.0 107.464 High Low
cufflinks 55.1781 10.4893 99.8669 High  
cufflinks 141.079 0.0 298.537 High High
cufflinks 64.3296 0.0 131.862 High  
cufflinks 160.219 1.37796 319.059 High High

0 Strain