Gene : Cre12.g555500 C. reinhardtii v5.6
Defline:  (1 of 1) 2.4.2.21 - Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase / phosphoribosyltransferase Genomic Order:  1385
Name:  ? Cre12.g555500 Secondary Identifier:  ? PAC:30792174
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre12.g555500 0.5kb upstream 0.5kb upstream 4146 true chromosome_12: 7562375-7566520 Chlamydomonas reinhardtii
Cre12.g555500 0.5kb upstream 0.5kb upstream 500 false chromosome_12: 7566021-7566520 Chlamydomonas reinhardtii
Cre12.g555500 0.5kb downstream 0.5kb downstream 4146 true chromosome_12: 7561875-7566020 Chlamydomonas reinhardtii
Cre12.g555500 0.5kb downstream 0.5kb downstream 500 false chromosome_12: 7561875-7562374 Chlamydomonas reinhardtii
Cre12.g555500 1.0kb upstream 1.0kb upstream 4646 true chromosome_12: 7562375-7567020 Chlamydomonas reinhardtii
Cre12.g555500 1.0kb upstream 1.0kb upstream 1000 false chromosome_12: 7566021-7567020 Chlamydomonas reinhardtii
Cre12.g555500 1.0kb downstream 1.0kb downstream 4646 true chromosome_12: 7561375-7566020 Chlamydomonas reinhardtii
Cre12.g555500 1.0kb downstream 1.0kb downstream 1000 false chromosome_12: 7561375-7562374 Chlamydomonas reinhardtii
Cre12.g555500 2.0kb upstream 2.0kb upstream 5646 true chromosome_12: 7562375-7568020 Chlamydomonas reinhardtii
Cre12.g555500 2.0kb upstream 2.0kb upstream 2000 false chromosome_12: 7566021-7568020 Chlamydomonas reinhardtii
Cre12.g555500 2.0kb downstream 2.0kb downstream 5646 true chromosome_12: 7560375-7566020 Chlamydomonas reinhardtii
Cre12.g555500 2.0kb downstream 2.0kb downstream 2000 false chromosome_12: 7560375-7562374 Chlamydomonas reinhardtii
Cre12.g555500 5.0kb upstream 5.0kb upstream 8646 true chromosome_12: 7562375-7571020 Chlamydomonas reinhardtii
Cre12.g555500 5.0kb upstream 5.0kb upstream 5000 false chromosome_12: 7566021-7571020 Chlamydomonas reinhardtii
Cre12.g555500 5.0kb downstream 5.0kb downstream 8646 true chromosome_12: 7557375-7566020 Chlamydomonas reinhardtii
Cre12.g555500 5.0kb downstream 5.0kb downstream 5000 false chromosome_12: 7557375-7562374 Chlamydomonas reinhardtii
Cre12.g555500 10.0kb upstream 10.0kb upstream 13646 true chromosome_12: 7562375-7576020 Chlamydomonas reinhardtii
Cre12.g555500 10.0kb upstream 10.0kb upstream 10000 false chromosome_12: 7566021-7576020 Chlamydomonas reinhardtii
Cre12.g555500 10.0kb downstream 10.0kb downstream 13646 true chromosome_12: 7552375-7566020 Chlamydomonas reinhardtii
Cre12.g555500 10.0kb downstream 10.0kb downstream 10000 false chromosome_12: 7552375-7562374 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124081064 5260 Chlorophyte Singleton cluster - no MSA
123398815 5275 Viridiplantae Singleton cluster - no MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.466       High
cufflinks 3.267        
cufflinks 5.245       High
cufflinks 1.794        
cufflinks 2.978        
cufflinks 4.854       High
cufflinks 2.168        
cufflinks 2.711        
cufflinks 4.508        
cufflinks 0.543       Low
cufflinks 2.216        
cufflinks 1.815        
cufflinks 5.446       High
cufflinks 2.423        
cufflinks 1.565        
cufflinks 5.488       High
cufflinks 0.228       Low
cufflinks 2.58        
cufflinks 0.242       Low
cufflinks 0.492       Low
cufflinks 1.391        
cufflinks 0.667       Low
cufflinks 1.417        
cufflinks 3.213        
cufflinks 0.652       Low
cufflinks 34.373 0.874848 67.8712 High Low
cufflinks 6.87557 1.67914 12.072    
cufflinks 0.349958 0.0 1.06416   Low
cufflinks 1.81717 0.0912152 3.54312   Low
cufflinks 9.28272 1.85356 16.7119   High

0 Strain