Gene : SEC22 C. reinhardtii v5.6
Primary Identifier:  ? Cre12.g554700 Defline:  (1 of 1) K08517 - vesicle transport protein SEC22 (SEC22)
Genomic Order:  1402 Name:  ? Cre12.g554700
Secondary Identifier:  ? PAC:30792007
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre12.g554700 0.5kb upstream 0.5kb upstream 2836 true chromosome_12: 7643235-7646070 Chlamydomonas reinhardtii
Cre12.g554700 0.5kb upstream 0.5kb upstream 500 false chromosome_12: 7645571-7646070 Chlamydomonas reinhardtii
Cre12.g554700 0.5kb downstream 0.5kb downstream 2836 true chromosome_12: 7642735-7645570 Chlamydomonas reinhardtii
Cre12.g554700 0.5kb downstream 0.5kb downstream 500 false chromosome_12: 7642735-7643234 Chlamydomonas reinhardtii
Cre12.g554700 1.0kb upstream 1.0kb upstream 3336 true chromosome_12: 7643235-7646570 Chlamydomonas reinhardtii
Cre12.g554700 1.0kb upstream 1.0kb upstream 1000 false chromosome_12: 7645571-7646570 Chlamydomonas reinhardtii
Cre12.g554700 1.0kb downstream 1.0kb downstream 3336 true chromosome_12: 7642235-7645570 Chlamydomonas reinhardtii
Cre12.g554700 1.0kb downstream 1.0kb downstream 1000 false chromosome_12: 7642235-7643234 Chlamydomonas reinhardtii
Cre12.g554700 2.0kb upstream 2.0kb upstream 4336 true chromosome_12: 7643235-7647570 Chlamydomonas reinhardtii
Cre12.g554700 2.0kb upstream 2.0kb upstream 2000 false chromosome_12: 7645571-7647570 Chlamydomonas reinhardtii
Cre12.g554700 2.0kb downstream 2.0kb downstream 4336 true chromosome_12: 7641235-7645570 Chlamydomonas reinhardtii
Cre12.g554700 2.0kb downstream 2.0kb downstream 2000 false chromosome_12: 7641235-7643234 Chlamydomonas reinhardtii
Cre12.g554700 5.0kb upstream 5.0kb upstream 7336 true chromosome_12: 7643235-7650570 Chlamydomonas reinhardtii
Cre12.g554700 5.0kb upstream 5.0kb upstream 5000 false chromosome_12: 7645571-7650570 Chlamydomonas reinhardtii
Cre12.g554700 5.0kb downstream 5.0kb downstream 7336 true chromosome_12: 7638235-7645570 Chlamydomonas reinhardtii
Cre12.g554700 5.0kb downstream 5.0kb downstream 5000 false chromosome_12: 7638235-7643234 Chlamydomonas reinhardtii
Cre12.g554700 10.0kb upstream 10.0kb upstream 12336 true chromosome_12: 7643235-7655570 Chlamydomonas reinhardtii
Cre12.g554700 10.0kb upstream 10.0kb upstream 10000 false chromosome_12: 7645571-7655570 Chlamydomonas reinhardtii
Cre12.g554700 10.0kb downstream 10.0kb downstream 12336 true chromosome_12: 7633235-7645570 Chlamydomonas reinhardtii
Cre12.g554700 10.0kb downstream 10.0kb downstream 10000 false chromosome_12: 7633235-7643234 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124109916 5260 Chlorophyte View MSA
123424515 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.244        
cufflinks 11.41        
cufflinks 13.453       High
cufflinks 11.604        
cufflinks 11.879        
cufflinks 9.77        
cufflinks 15.627     High High
cufflinks 13.632       High
cufflinks 4.509       Low
cufflinks 4.899       Low
cufflinks 8.681        
cufflinks 13.074        
cufflinks 8.892        
cufflinks 10.378        
cufflinks 8.526        
cufflinks 5.556       Low
cufflinks 7.686        
cufflinks 10.526        
cufflinks 6.127     High Low
cufflinks 14.234     High High
cufflinks 7.577        
cufflinks 4.66       Low
cufflinks 13.946     High High
cufflinks 12.55        
cufflinks 6.252        
cufflinks 13.1301 2.04812 24.2122    
cufflinks 6.79532 0.74766 12.843    
cufflinks 25.2517 0.0 50.7622   High
cufflinks 9.89213 1.66917 18.1151    
cufflinks 14.2516 2.79866 25.7045    

0 Strain