Gene : Cre12.g554050 C. reinhardtii v5.6
Genomic Order:  1414 Name:  ? Cre12.g554050
Secondary Identifier:  ? PAC:30792440
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre12.g554050 0.5kb upstream 0.5kb upstream 8433 true chromosome_12: 7701031-7709463 Chlamydomonas reinhardtii
Cre12.g554050 0.5kb upstream 0.5kb upstream 500 false chromosome_12: 7701031-7701530 Chlamydomonas reinhardtii
Cre12.g554050 0.5kb downstream 0.5kb downstream 8433 true chromosome_12: 7701531-7709963 Chlamydomonas reinhardtii
Cre12.g554050 0.5kb downstream 0.5kb downstream 500 false chromosome_12: 7709464-7709963 Chlamydomonas reinhardtii
Cre12.g554050 1.0kb upstream 1.0kb upstream 8933 true chromosome_12: 7700531-7709463 Chlamydomonas reinhardtii
Cre12.g554050 1.0kb upstream 1.0kb upstream 1000 false chromosome_12: 7700531-7701530 Chlamydomonas reinhardtii
Cre12.g554050 1.0kb downstream 1.0kb downstream 8933 true chromosome_12: 7701531-7710463 Chlamydomonas reinhardtii
Cre12.g554050 1.0kb downstream 1.0kb downstream 1000 false chromosome_12: 7709464-7710463 Chlamydomonas reinhardtii
Cre12.g554050 2.0kb upstream 2.0kb upstream 9933 true chromosome_12: 7699531-7709463 Chlamydomonas reinhardtii
Cre12.g554050 2.0kb upstream 2.0kb upstream 2000 false chromosome_12: 7699531-7701530 Chlamydomonas reinhardtii
Cre12.g554050 2.0kb downstream 2.0kb downstream 9933 true chromosome_12: 7701531-7711463 Chlamydomonas reinhardtii
Cre12.g554050 2.0kb downstream 2.0kb downstream 2000 false chromosome_12: 7709464-7711463 Chlamydomonas reinhardtii
Cre12.g554050 5.0kb upstream 5.0kb upstream 12933 true chromosome_12: 7696531-7709463 Chlamydomonas reinhardtii
Cre12.g554050 5.0kb upstream 5.0kb upstream 5000 false chromosome_12: 7696531-7701530 Chlamydomonas reinhardtii
Cre12.g554050 5.0kb downstream 5.0kb downstream 12933 true chromosome_12: 7701531-7714463 Chlamydomonas reinhardtii
Cre12.g554050 5.0kb downstream 5.0kb downstream 5000 false chromosome_12: 7709464-7714463 Chlamydomonas reinhardtii
Cre12.g554050 10.0kb upstream 10.0kb upstream 17933 true chromosome_12: 7691531-7709463 Chlamydomonas reinhardtii
Cre12.g554050 10.0kb upstream 10.0kb upstream 10000 false chromosome_12: 7691531-7701530 Chlamydomonas reinhardtii
Cre12.g554050 10.0kb downstream 10.0kb downstream 17933 true chromosome_12: 7701531-7719463 Chlamydomonas reinhardtii
Cre12.g554050 10.0kb downstream 10.0kb downstream 10000 false chromosome_12: 7709464-7719463 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124085809 5260 Chlorophyte View MSA
123403250 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.487       Low
cufflinks 0.993        
cufflinks 0.871        
cufflinks 1.13        
cufflinks 0.753        
cufflinks 0.733        
cufflinks 1.136        
cufflinks 1.274        
cufflinks 0.483       Low
cufflinks 0.306       Low
cufflinks 1.16        
cufflinks 1.429       High
cufflinks 0.523       Low
cufflinks 0.726        
cufflinks 1.334        
cufflinks 0.715        
cufflinks 0.804        
cufflinks 0.818        
cufflinks 0.569       Low
cufflinks 1.711       High
cufflinks 1.241        
cufflinks 1.035        
cufflinks 1.481       High
cufflinks 1.393       High
cufflinks 1.022        
cufflinks 0.318272 0.0 0.65503   Low
cufflinks 1.77094 0.263703 3.27817    
cufflinks 0.870264 0.0 2.00319    
cufflinks 1.47033 0.214768 2.72589   High
cufflinks 1.20902 0.105522 2.31251    

0 Strain