Gene : Cre12.g557800 C. reinhardtii v5.6
Defline:  (1 of 1) K06875 - programmed cell death protein 5 (PDCD5, TFAR19) Genomic Order:  1337
Name:  ? Cre12.g557800 Secondary Identifier:  ? PAC:30792365
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre12.g557800 0.5kb upstream 0.5kb upstream 2506 true chromosome_12: 7276515-7279020 Chlamydomonas reinhardtii
Cre12.g557800 0.5kb upstream 0.5kb upstream 500 false chromosome_12: 7276515-7277014 Chlamydomonas reinhardtii
Cre12.g557800 0.5kb downstream 0.5kb downstream 2506 true chromosome_12: 7277015-7279520 Chlamydomonas reinhardtii
Cre12.g557800 0.5kb downstream 0.5kb downstream 500 false chromosome_12: 7279021-7279520 Chlamydomonas reinhardtii
Cre12.g557800 1.0kb upstream 1.0kb upstream 3006 true chromosome_12: 7276015-7279020 Chlamydomonas reinhardtii
Cre12.g557800 1.0kb upstream 1.0kb upstream 1000 false chromosome_12: 7276015-7277014 Chlamydomonas reinhardtii
Cre12.g557800 1.0kb downstream 1.0kb downstream 3006 true chromosome_12: 7277015-7280020 Chlamydomonas reinhardtii
Cre12.g557800 1.0kb downstream 1.0kb downstream 1000 false chromosome_12: 7279021-7280020 Chlamydomonas reinhardtii
Cre12.g557800 2.0kb upstream 2.0kb upstream 4006 true chromosome_12: 7275015-7279020 Chlamydomonas reinhardtii
Cre12.g557800 2.0kb upstream 2.0kb upstream 2000 false chromosome_12: 7275015-7277014 Chlamydomonas reinhardtii
Cre12.g557800 2.0kb downstream 2.0kb downstream 4006 true chromosome_12: 7277015-7281020 Chlamydomonas reinhardtii
Cre12.g557800 2.0kb downstream 2.0kb downstream 2000 false chromosome_12: 7279021-7281020 Chlamydomonas reinhardtii
Cre12.g557800 5.0kb upstream 5.0kb upstream 7006 true chromosome_12: 7272015-7279020 Chlamydomonas reinhardtii
Cre12.g557800 5.0kb upstream 5.0kb upstream 5000 false chromosome_12: 7272015-7277014 Chlamydomonas reinhardtii
Cre12.g557800 5.0kb downstream 5.0kb downstream 7006 true chromosome_12: 7277015-7284020 Chlamydomonas reinhardtii
Cre12.g557800 5.0kb downstream 5.0kb downstream 5000 false chromosome_12: 7279021-7284020 Chlamydomonas reinhardtii
Cre12.g557800 10.0kb upstream 10.0kb upstream 12006 true chromosome_12: 7267015-7279020 Chlamydomonas reinhardtii
Cre12.g557800 10.0kb upstream 10.0kb upstream 10000 false chromosome_12: 7267015-7277014 Chlamydomonas reinhardtii
Cre12.g557800 10.0kb downstream 10.0kb downstream 12006 true chromosome_12: 7277015-7289020 Chlamydomonas reinhardtii
Cre12.g557800 10.0kb downstream 10.0kb downstream 10000 false chromosome_12: 7279021-7289020 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124108867 5260 Chlorophyte View MSA
123426803 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.569        
cufflinks 15.106     High  
cufflinks 19.825     High High
cufflinks 17.525     High High
cufflinks 14.11     High  
cufflinks 13.436     High  
cufflinks 17.156     High High
cufflinks 14.504        
cufflinks 11.635     High  
cufflinks 8.961     High Low
cufflinks 15.209     High  
cufflinks 12.148        
cufflinks 12.267     High  
cufflinks 14.617     High  
cufflinks 11.903        
cufflinks 13.697     High  
cufflinks 7.227       Low
cufflinks 14.839     High  
cufflinks 9.241     High  
cufflinks 19.071     High High
cufflinks 9.234        
cufflinks 8.398       Low
cufflinks 16.421     High  
cufflinks 13.606        
cufflinks 6.009       Low
cufflinks 15.9141 2.42529 29.403    
cufflinks 19.7336 5.35583 34.1113    
cufflinks 12.5665 0.0 25.5526    
cufflinks 18.6807 2.53474 34.8268    
cufflinks 28.0249 5.32 50.7298   High

0 Strain