Gene : Cre13.g590251 C. reinhardtii v5.6
Defline:  (1 of 3) PTHR23301 - CHITIN BINDING PERITROPHIN-A Genomic Order:  641
Name:  ? Cre13.g590251 Secondary Identifier:  ? PAC:30783960
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre13.g590251 0.5kb upstream 0.5kb upstream 4416 true chromosome_13: 3870744-3875159 Chlamydomonas reinhardtii
Cre13.g590251 0.5kb upstream 0.5kb upstream 500 false chromosome_13: 3870744-3871243 Chlamydomonas reinhardtii
Cre13.g590251 0.5kb downstream 0.5kb downstream 4416 true chromosome_13: 3871244-3875659 Chlamydomonas reinhardtii
Cre13.g590251 0.5kb downstream 0.5kb downstream 500 false chromosome_13: 3875160-3875659 Chlamydomonas reinhardtii
Cre13.g590251 1.0kb upstream 1.0kb upstream 4916 true chromosome_13: 3870244-3875159 Chlamydomonas reinhardtii
Cre13.g590251 1.0kb upstream 1.0kb upstream 1000 false chromosome_13: 3870244-3871243 Chlamydomonas reinhardtii
Cre13.g590251 1.0kb downstream 1.0kb downstream 4916 true chromosome_13: 3871244-3876159 Chlamydomonas reinhardtii
Cre13.g590251 1.0kb downstream 1.0kb downstream 1000 false chromosome_13: 3875160-3876159 Chlamydomonas reinhardtii
Cre13.g590251 2.0kb upstream 2.0kb upstream 5916 true chromosome_13: 3869244-3875159 Chlamydomonas reinhardtii
Cre13.g590251 2.0kb upstream 2.0kb upstream 2000 false chromosome_13: 3869244-3871243 Chlamydomonas reinhardtii
Cre13.g590251 2.0kb downstream 2.0kb downstream 5916 true chromosome_13: 3871244-3877159 Chlamydomonas reinhardtii
Cre13.g590251 2.0kb downstream 2.0kb downstream 2000 false chromosome_13: 3875160-3877159 Chlamydomonas reinhardtii
Cre13.g590251 5.0kb upstream 5.0kb upstream 8916 true chromosome_13: 3866244-3875159 Chlamydomonas reinhardtii
Cre13.g590251 5.0kb upstream 5.0kb upstream 5000 false chromosome_13: 3866244-3871243 Chlamydomonas reinhardtii
Cre13.g590251 5.0kb downstream 5.0kb downstream 8916 true chromosome_13: 3871244-3880159 Chlamydomonas reinhardtii
Cre13.g590251 5.0kb downstream 5.0kb downstream 5000 false chromosome_13: 3875160-3880159 Chlamydomonas reinhardtii
Cre13.g590251 10.0kb upstream 10.0kb upstream 13916 true chromosome_13: 3861244-3875159 Chlamydomonas reinhardtii
Cre13.g590251 10.0kb upstream 10.0kb upstream 10000 false chromosome_13: 3861244-3871243 Chlamydomonas reinhardtii
Cre13.g590251 10.0kb downstream 10.0kb downstream 13916 true chromosome_13: 3871244-3885159 Chlamydomonas reinhardtii
Cre13.g590251 10.0kb downstream 10.0kb downstream 10000 false chromosome_13: 3875160-3885159 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124079182 5260 Chlorophyte Singleton cluster - no MSA
123397060 5275 Viridiplantae Singleton cluster - no MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0186179 0.0 0.0627886 Low High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain