Gene : Cre13.g589250 C. reinhardtii v5.6
Defline:  (1 of 4) PTHR16255:SF4 - SPORULATION PROTEIN RMD8 Genomic Order:  622
Name:  ? Cre13.g589250 Secondary Identifier:  ? PAC:30784107
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre13.g589250 0.5kb upstream 0.5kb upstream 5621 true chromosome_13: 3717954-3723574 Chlamydomonas reinhardtii
Cre13.g589250 0.5kb upstream 0.5kb upstream 500 false chromosome_13: 3717954-3718453 Chlamydomonas reinhardtii
Cre13.g589250 0.5kb downstream 0.5kb downstream 5621 true chromosome_13: 3718454-3724074 Chlamydomonas reinhardtii
Cre13.g589250 0.5kb downstream 0.5kb downstream 500 false chromosome_13: 3723575-3724074 Chlamydomonas reinhardtii
Cre13.g589250 1.0kb upstream 1.0kb upstream 6121 true chromosome_13: 3717454-3723574 Chlamydomonas reinhardtii
Cre13.g589250 1.0kb upstream 1.0kb upstream 1000 false chromosome_13: 3717454-3718453 Chlamydomonas reinhardtii
Cre13.g589250 1.0kb downstream 1.0kb downstream 6121 true chromosome_13: 3718454-3724574 Chlamydomonas reinhardtii
Cre13.g589250 1.0kb downstream 1.0kb downstream 1000 false chromosome_13: 3723575-3724574 Chlamydomonas reinhardtii
Cre13.g589250 2.0kb upstream 2.0kb upstream 7121 true chromosome_13: 3716454-3723574 Chlamydomonas reinhardtii
Cre13.g589250 2.0kb upstream 2.0kb upstream 2000 false chromosome_13: 3716454-3718453 Chlamydomonas reinhardtii
Cre13.g589250 2.0kb downstream 2.0kb downstream 7121 true chromosome_13: 3718454-3725574 Chlamydomonas reinhardtii
Cre13.g589250 2.0kb downstream 2.0kb downstream 2000 false chromosome_13: 3723575-3725574 Chlamydomonas reinhardtii
Cre13.g589250 5.0kb upstream 5.0kb upstream 10121 true chromosome_13: 3713454-3723574 Chlamydomonas reinhardtii
Cre13.g589250 5.0kb upstream 5.0kb upstream 5000 false chromosome_13: 3713454-3718453 Chlamydomonas reinhardtii
Cre13.g589250 5.0kb downstream 5.0kb downstream 10121 true chromosome_13: 3718454-3728574 Chlamydomonas reinhardtii
Cre13.g589250 5.0kb downstream 5.0kb downstream 5000 false chromosome_13: 3723575-3728574 Chlamydomonas reinhardtii
Cre13.g589250 10.0kb upstream 10.0kb upstream 15121 true chromosome_13: 3708454-3723574 Chlamydomonas reinhardtii
Cre13.g589250 10.0kb upstream 10.0kb upstream 10000 false chromosome_13: 3708454-3718453 Chlamydomonas reinhardtii
Cre13.g589250 10.0kb downstream 10.0kb downstream 15121 true chromosome_13: 3718454-3733574 Chlamydomonas reinhardtii
Cre13.g589250 10.0kb downstream 10.0kb downstream 10000 false chromosome_13: 3723575-3733574 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124112843 5260 Chlorophyte View MSA
123425933 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.465       Low
cufflinks 5.112        
cufflinks 7.575       High
cufflinks 6.349       High
cufflinks 5.493        
cufflinks 4.512        
cufflinks 5.339        
cufflinks 5.783        
cufflinks 1.798       Low
cufflinks 2.343        
cufflinks 5.587        
cufflinks 4.128        
cufflinks 4.117        
cufflinks 5.013        
cufflinks 4.182        
cufflinks 1.875       Low
cufflinks 1.442       Low
cufflinks 5.715        
cufflinks 2.176       Low
cufflinks 5.862        
cufflinks 4.502        
cufflinks 2.207       Low
cufflinks 4.476        
cufflinks 5.58        
cufflinks 1.766       Low
cufflinks 5.65252 0.906514 10.3985    
cufflinks 11.3542 2.82611 19.8824    
cufflinks 12.0452 0.0 24.2956    
cufflinks 10.0481 1.58401 18.5122    
cufflinks 13.5789 2.70981 24.4479   High

0 Strain