Gene : CYN50 C. reinhardtii v5.6
Primary Identifier:  ? Cre13.g603950 Defline:  Cyclophilin
Genomic Order:  734 Name:  ? Cre13.g603950
Secondary Identifier:  ? PAC:30784092
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre13.g603950 0.5kb upstream 0.5kb upstream 5176 true chromosome_13: 4585949-4591124 Chlamydomonas reinhardtii
Cre13.g603950 0.5kb upstream 0.5kb upstream 500 false chromosome_13: 4590625-4591124 Chlamydomonas reinhardtii
Cre13.g603950 0.5kb downstream 0.5kb downstream 5176 true chromosome_13: 4585449-4590624 Chlamydomonas reinhardtii
Cre13.g603950 0.5kb downstream 0.5kb downstream 500 false chromosome_13: 4585449-4585948 Chlamydomonas reinhardtii
Cre13.g603950 1.0kb upstream 1.0kb upstream 5676 true chromosome_13: 4585949-4591624 Chlamydomonas reinhardtii
Cre13.g603950 1.0kb upstream 1.0kb upstream 1000 false chromosome_13: 4590625-4591624 Chlamydomonas reinhardtii
Cre13.g603950 1.0kb downstream 1.0kb downstream 5676 true chromosome_13: 4584949-4590624 Chlamydomonas reinhardtii
Cre13.g603950 1.0kb downstream 1.0kb downstream 1000 false chromosome_13: 4584949-4585948 Chlamydomonas reinhardtii
Cre13.g603950 2.0kb upstream 2.0kb upstream 6676 true chromosome_13: 4585949-4592624 Chlamydomonas reinhardtii
Cre13.g603950 2.0kb upstream 2.0kb upstream 2000 false chromosome_13: 4590625-4592624 Chlamydomonas reinhardtii
Cre13.g603950 2.0kb downstream 2.0kb downstream 6676 true chromosome_13: 4583949-4590624 Chlamydomonas reinhardtii
Cre13.g603950 2.0kb downstream 2.0kb downstream 2000 false chromosome_13: 4583949-4585948 Chlamydomonas reinhardtii
Cre13.g603950 5.0kb upstream 5.0kb upstream 9676 true chromosome_13: 4585949-4595624 Chlamydomonas reinhardtii
Cre13.g603950 5.0kb upstream 5.0kb upstream 5000 false chromosome_13: 4590625-4595624 Chlamydomonas reinhardtii
Cre13.g603950 5.0kb downstream 5.0kb downstream 9676 true chromosome_13: 4580949-4590624 Chlamydomonas reinhardtii
Cre13.g603950 5.0kb downstream 5.0kb downstream 5000 false chromosome_13: 4580949-4585948 Chlamydomonas reinhardtii
Cre13.g603950 10.0kb upstream 10.0kb upstream 14676 true chromosome_13: 4585949-4600624 Chlamydomonas reinhardtii
Cre13.g603950 10.0kb upstream 10.0kb upstream 10000 false chromosome_13: 4590625-4600624 Chlamydomonas reinhardtii
Cre13.g603950 10.0kb downstream 10.0kb downstream 14676 true chromosome_13: 4575949-4590624 Chlamydomonas reinhardtii
Cre13.g603950 10.0kb downstream 10.0kb downstream 10000 false chromosome_13: 4575949-4585948 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124110721 5260 Chlorophyte View MSA
123428077 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.032        
cufflinks 1.679        
cufflinks 1.282        
cufflinks 1.173        
cufflinks 1.552        
cufflinks 1.865        
cufflinks 2.001        
cufflinks 1.673        
cufflinks 1.478        
cufflinks 1.304        
cufflinks 0.529       Low
cufflinks 1.522        
cufflinks 1.256        
cufflinks 1.86        
cufflinks 0.898        
cufflinks 1.749        
cufflinks 1.13        
cufflinks 1.529        
cufflinks 0.124       Low
cufflinks 0.808        
cufflinks 1.269        
cufflinks 0.827        
cufflinks 1.023        
cufflinks 1.058        
cufflinks 1.202        
cufflinks 2.12685 0.172636 4.08107    
cufflinks 3.53113 0.388515 6.67375    
cufflinks 7.63553 0.0 15.5034   High
cufflinks 1.57162 0.0698099 3.07343    
cufflinks 5.99383 1.06925 10.9184   High

0 Strain