Gene : CYG6 C. reinhardtii v5.6
Primary Identifier:  ? Cre13.g607100 Defline:  (1 of 25) PTHR11017//PTHR11017:SF145 - LEUCINE-RICH REPEAT-CONTAINING PROTEIN // SUBFAMILY NOT NAMED
Genomic Order:  797 Name:  ? Cre13.g607100
Secondary Identifier:  ? PAC:30784235
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre13.g607100 0.5kb upstream 0.5kb upstream 15342 true chromosome_13: 5058994-5074335 Chlamydomonas reinhardtii
Cre13.g607100 0.5kb upstream 0.5kb upstream 500 false chromosome_13: 5073836-5074335 Chlamydomonas reinhardtii
Cre13.g607100 0.5kb downstream 0.5kb downstream 15342 true chromosome_13: 5058494-5073835 Chlamydomonas reinhardtii
Cre13.g607100 0.5kb downstream 0.5kb downstream 500 false chromosome_13: 5058494-5058993 Chlamydomonas reinhardtii
Cre13.g607100 1.0kb upstream 1.0kb upstream 15842 true chromosome_13: 5058994-5074835 Chlamydomonas reinhardtii
Cre13.g607100 1.0kb upstream 1.0kb upstream 1000 false chromosome_13: 5073836-5074835 Chlamydomonas reinhardtii
Cre13.g607100 1.0kb downstream 1.0kb downstream 15842 true chromosome_13: 5057994-5073835 Chlamydomonas reinhardtii
Cre13.g607100 1.0kb downstream 1.0kb downstream 1000 false chromosome_13: 5057994-5058993 Chlamydomonas reinhardtii
Cre13.g607100 2.0kb upstream 2.0kb upstream 16842 true chromosome_13: 5058994-5075835 Chlamydomonas reinhardtii
Cre13.g607100 2.0kb upstream 2.0kb upstream 2000 false chromosome_13: 5073836-5075835 Chlamydomonas reinhardtii
Cre13.g607100 2.0kb downstream 2.0kb downstream 16842 true chromosome_13: 5056994-5073835 Chlamydomonas reinhardtii
Cre13.g607100 2.0kb downstream 2.0kb downstream 2000 false chromosome_13: 5056994-5058993 Chlamydomonas reinhardtii
Cre13.g607100 5.0kb upstream 5.0kb upstream 19842 true chromosome_13: 5058994-5078835 Chlamydomonas reinhardtii
Cre13.g607100 5.0kb upstream 5.0kb upstream 5000 false chromosome_13: 5073836-5078835 Chlamydomonas reinhardtii
Cre13.g607100 5.0kb downstream 5.0kb downstream 19842 true chromosome_13: 5053994-5073835 Chlamydomonas reinhardtii
Cre13.g607100 5.0kb downstream 5.0kb downstream 5000 false chromosome_13: 5053994-5058993 Chlamydomonas reinhardtii
Cre13.g607100 10.0kb upstream 10.0kb upstream 24842 true chromosome_13: 5058994-5083835 Chlamydomonas reinhardtii
Cre13.g607100 10.0kb upstream 10.0kb upstream 10000 false chromosome_13: 5073836-5083835 Chlamydomonas reinhardtii
Cre13.g607100 10.0kb downstream 10.0kb downstream 24842 true chromosome_13: 5048994-5073835 Chlamydomonas reinhardtii
Cre13.g607100 10.0kb downstream 10.0kb downstream 10000 false chromosome_13: 5048994-5058993 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124081623 5260 Chlorophyte View MSA
123399344 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.311       Low
cufflinks 2.822        
cufflinks 4.086        
cufflinks 4.55        
cufflinks 2.356        
cufflinks 2.752        
cufflinks 2.843        
cufflinks 4.164        
cufflinks 1.607       Low
cufflinks 0.912       Low
cufflinks 6.596       High
cufflinks 5.689       High
cufflinks 1.885        
cufflinks 3.151        
cufflinks 3.754        
cufflinks 2.425        
cufflinks 3.632        
cufflinks 3.298        
cufflinks 1.101       Low
cufflinks 6.707       High
cufflinks 4.975        
cufflinks 2.741        
cufflinks 3.21        
cufflinks 4.568        
cufflinks 3.094        
cufflinks 5.13073 0.359594 9.90187    
cufflinks 5.66094 1.52381 9.79807    
cufflinks 5.70803 0.0 11.508    
cufflinks 6.37064 0.300077 12.4412    
cufflinks 11.3244 1.202 21.4467    

0 Strain