Gene : TSY1 C. reinhardtii v5.6
Primary Identifier:  ? Cre13.g606050 Defline:  (1 of 1) PTHR11766:SF0 - TYROSINE--TRNA LIGASE, MITOCHONDRIAL
Genomic Order:  775 Name:  ? Cre13.g606050
Secondary Identifier:  ? PAC:30783924
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Creinhardtii TRNA-CHARGING-PWY Chlamydomonas reinhardtii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre13.g606050 0.5kb upstream 0.5kb upstream 5530 true chromosome_13: 4920698-4926227 Chlamydomonas reinhardtii
Cre13.g606050 0.5kb upstream 0.5kb upstream 500 false chromosome_13: 4920698-4921197 Chlamydomonas reinhardtii
Cre13.g606050 0.5kb downstream 0.5kb downstream 5530 true chromosome_13: 4921198-4926727 Chlamydomonas reinhardtii
Cre13.g606050 0.5kb downstream 0.5kb downstream 500 false chromosome_13: 4926228-4926727 Chlamydomonas reinhardtii
Cre13.g606050 1.0kb upstream 1.0kb upstream 6030 true chromosome_13: 4920198-4926227 Chlamydomonas reinhardtii
Cre13.g606050 1.0kb upstream 1.0kb upstream 1000 false chromosome_13: 4920198-4921197 Chlamydomonas reinhardtii
Cre13.g606050 1.0kb downstream 1.0kb downstream 6030 true chromosome_13: 4921198-4927227 Chlamydomonas reinhardtii
Cre13.g606050 1.0kb downstream 1.0kb downstream 1000 false chromosome_13: 4926228-4927227 Chlamydomonas reinhardtii
Cre13.g606050 2.0kb upstream 2.0kb upstream 7030 true chromosome_13: 4919198-4926227 Chlamydomonas reinhardtii
Cre13.g606050 2.0kb upstream 2.0kb upstream 2000 false chromosome_13: 4919198-4921197 Chlamydomonas reinhardtii
Cre13.g606050 2.0kb downstream 2.0kb downstream 7030 true chromosome_13: 4921198-4928227 Chlamydomonas reinhardtii
Cre13.g606050 2.0kb downstream 2.0kb downstream 2000 false chromosome_13: 4926228-4928227 Chlamydomonas reinhardtii
Cre13.g606050 5.0kb upstream 5.0kb upstream 10030 true chromosome_13: 4916198-4926227 Chlamydomonas reinhardtii
Cre13.g606050 5.0kb upstream 5.0kb upstream 5000 false chromosome_13: 4916198-4921197 Chlamydomonas reinhardtii
Cre13.g606050 5.0kb downstream 5.0kb downstream 10030 true chromosome_13: 4921198-4931227 Chlamydomonas reinhardtii
Cre13.g606050 5.0kb downstream 5.0kb downstream 5000 false chromosome_13: 4926228-4931227 Chlamydomonas reinhardtii
Cre13.g606050 10.0kb upstream 10.0kb upstream 15030 true chromosome_13: 4911198-4926227 Chlamydomonas reinhardtii
Cre13.g606050 10.0kb upstream 10.0kb upstream 10000 false chromosome_13: 4911198-4921197 Chlamydomonas reinhardtii
Cre13.g606050 10.0kb downstream 10.0kb downstream 15030 true chromosome_13: 4921198-4936227 Chlamydomonas reinhardtii
Cre13.g606050 10.0kb downstream 10.0kb downstream 10000 false chromosome_13: 4926228-4936227 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124110445 5260 Chlorophyte View MSA
123424944 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.724       High
cufflinks 2.099        
cufflinks 0.949        
cufflinks 1.203        
cufflinks 2.409        
cufflinks 1.733        
cufflinks 0.535       Low
cufflinks 1.295        
cufflinks 5.259       High
cufflinks 0.807        
cufflinks 1.55        
cufflinks 1.486        
cufflinks 1.29        
cufflinks 1.791        
cufflinks 1.459        
cufflinks 4.071       High
cufflinks 3.715       High
cufflinks 1.422        
cufflinks 0.224       Low
cufflinks 0.585       Low
cufflinks 1.248        
cufflinks 3.871       High
cufflinks 0.712       Low
cufflinks 1.816        
cufflinks 3.3       High
cufflinks 5.61674 0.903158 10.3303   Low
cufflinks 17.3256 4.66834 29.9828   High
cufflinks 2.02391 0.0 4.85651    
cufflinks 4.44435 0.6191 8.2696    
cufflinks 14.1505 2.84278 25.4581    

0 Strain