Gene : Cre13.g578501 C. reinhardtii v5.6
Defline:  (1 of 5) PTHR12706:SF13 - RING/FYVE/PHD ZINC FINGER DOMAIN-CONTAINING PROTEIN Genomic Order:  382
Name:  ? Cre13.g578501 Secondary Identifier:  ? PAC:30784198
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre13.g578501 0.5kb upstream 0.5kb upstream 17470 true chromosome_13: 2209568-2227037 Chlamydomonas reinhardtii
Cre13.g578501 0.5kb upstream 0.5kb upstream 500 false chromosome_13: 2209568-2210067 Chlamydomonas reinhardtii
Cre13.g578501 0.5kb downstream 0.5kb downstream 17470 true chromosome_13: 2210068-2227537 Chlamydomonas reinhardtii
Cre13.g578501 0.5kb downstream 0.5kb downstream 500 false chromosome_13: 2227038-2227537 Chlamydomonas reinhardtii
Cre13.g578501 1.0kb upstream 1.0kb upstream 17970 true chromosome_13: 2209068-2227037 Chlamydomonas reinhardtii
Cre13.g578501 1.0kb upstream 1.0kb upstream 1000 false chromosome_13: 2209068-2210067 Chlamydomonas reinhardtii
Cre13.g578501 1.0kb downstream 1.0kb downstream 17970 true chromosome_13: 2210068-2228037 Chlamydomonas reinhardtii
Cre13.g578501 1.0kb downstream 1.0kb downstream 1000 false chromosome_13: 2227038-2228037 Chlamydomonas reinhardtii
Cre13.g578501 2.0kb upstream 2.0kb upstream 18970 true chromosome_13: 2208068-2227037 Chlamydomonas reinhardtii
Cre13.g578501 2.0kb upstream 2.0kb upstream 2000 false chromosome_13: 2208068-2210067 Chlamydomonas reinhardtii
Cre13.g578501 2.0kb downstream 2.0kb downstream 18970 true chromosome_13: 2210068-2229037 Chlamydomonas reinhardtii
Cre13.g578501 2.0kb downstream 2.0kb downstream 2000 false chromosome_13: 2227038-2229037 Chlamydomonas reinhardtii
Cre13.g578501 5.0kb upstream 5.0kb upstream 21970 true chromosome_13: 2205068-2227037 Chlamydomonas reinhardtii
Cre13.g578501 5.0kb upstream 5.0kb upstream 5000 false chromosome_13: 2205068-2210067 Chlamydomonas reinhardtii
Cre13.g578501 5.0kb downstream 5.0kb downstream 21970 true chromosome_13: 2210068-2232037 Chlamydomonas reinhardtii
Cre13.g578501 5.0kb downstream 5.0kb downstream 5000 false chromosome_13: 2227038-2232037 Chlamydomonas reinhardtii
Cre13.g578501 10.0kb upstream 10.0kb upstream 26970 true chromosome_13: 2200068-2227037 Chlamydomonas reinhardtii
Cre13.g578501 10.0kb upstream 10.0kb upstream 10000 false chromosome_13: 2200068-2210067 Chlamydomonas reinhardtii
Cre13.g578501 10.0kb downstream 10.0kb downstream 26970 true chromosome_13: 2210068-2237037 Chlamydomonas reinhardtii
Cre13.g578501 10.0kb downstream 10.0kb downstream 10000 false chromosome_13: 2227038-2237037 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124112150 5260 Chlorophyte View MSA
123424908 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.019     Low Low
cufflinks 0.366        
cufflinks 0.456       High
cufflinks 0.329        
cufflinks 0.169        
cufflinks 0.222        
cufflinks 0.577       High
cufflinks 0.423       High
cufflinks 0.036     Low Low
cufflinks 0.04     Low Low
cufflinks 0.322        
cufflinks 0.328        
cufflinks 0.134        
cufflinks 0.183        
cufflinks 0.225        
cufflinks 0.088     Low  
cufflinks 0.038     Low Low
cufflinks 0.295        
cufflinks 0.04     Low Low
cufflinks 0.177        
cufflinks 0.184        
cufflinks 0.107     Low  
cufflinks 0.449       High
cufflinks 0.347        
cufflinks 0.098     Low  
cufflinks 0.370702 0.0 0.745737   Low
cufflinks 1.32725 0.204767 2.44973    
cufflinks 0.696688 0.0 1.5964    
cufflinks 1.16654 0.162031 2.17106    
cufflinks 1.24212 0.170942 2.3133    

0 Strain