Gene : Cre13.g580050 C. reinhardtii v5.6
Defline:  (1 of 2) PTHR23074//PTHR23074:SF20 - AAA ATPASE // GH08677P Genomic Order:  421
Name:  ? Cre13.g580050 Secondary Identifier:  ? PAC:30784225
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre13.g580050 0.5kb upstream 0.5kb upstream 8239 true chromosome_13: 2469986-2478224 Chlamydomonas reinhardtii
Cre13.g580050 0.5kb upstream 0.5kb upstream 500 false chromosome_13: 2477725-2478224 Chlamydomonas reinhardtii
Cre13.g580050 0.5kb downstream 0.5kb downstream 8239 true chromosome_13: 2469486-2477724 Chlamydomonas reinhardtii
Cre13.g580050 0.5kb downstream 0.5kb downstream 500 false chromosome_13: 2469486-2469985 Chlamydomonas reinhardtii
Cre13.g580050 1.0kb upstream 1.0kb upstream 8739 true chromosome_13: 2469986-2478724 Chlamydomonas reinhardtii
Cre13.g580050 1.0kb upstream 1.0kb upstream 1000 false chromosome_13: 2477725-2478724 Chlamydomonas reinhardtii
Cre13.g580050 1.0kb downstream 1.0kb downstream 8739 true chromosome_13: 2468986-2477724 Chlamydomonas reinhardtii
Cre13.g580050 1.0kb downstream 1.0kb downstream 1000 false chromosome_13: 2468986-2469985 Chlamydomonas reinhardtii
Cre13.g580050 2.0kb upstream 2.0kb upstream 9739 true chromosome_13: 2469986-2479724 Chlamydomonas reinhardtii
Cre13.g580050 2.0kb upstream 2.0kb upstream 2000 false chromosome_13: 2477725-2479724 Chlamydomonas reinhardtii
Cre13.g580050 2.0kb downstream 2.0kb downstream 9739 true chromosome_13: 2467986-2477724 Chlamydomonas reinhardtii
Cre13.g580050 2.0kb downstream 2.0kb downstream 2000 false chromosome_13: 2467986-2469985 Chlamydomonas reinhardtii
Cre13.g580050 5.0kb upstream 5.0kb upstream 12739 true chromosome_13: 2469986-2482724 Chlamydomonas reinhardtii
Cre13.g580050 5.0kb upstream 5.0kb upstream 5000 false chromosome_13: 2477725-2482724 Chlamydomonas reinhardtii
Cre13.g580050 5.0kb downstream 5.0kb downstream 12739 true chromosome_13: 2464986-2477724 Chlamydomonas reinhardtii
Cre13.g580050 5.0kb downstream 5.0kb downstream 5000 false chromosome_13: 2464986-2469985 Chlamydomonas reinhardtii
Cre13.g580050 10.0kb upstream 10.0kb upstream 17739 true chromosome_13: 2469986-2487724 Chlamydomonas reinhardtii
Cre13.g580050 10.0kb upstream 10.0kb upstream 10000 false chromosome_13: 2477725-2487724 Chlamydomonas reinhardtii
Cre13.g580050 10.0kb downstream 10.0kb downstream 17739 true chromosome_13: 2459986-2477724 Chlamydomonas reinhardtii
Cre13.g580050 10.0kb downstream 10.0kb downstream 10000 false chromosome_13: 2459986-2469985 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124113439 5260 Chlorophyte View MSA
123428918 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.564        
cufflinks 0.815       High
cufflinks 0.548        
cufflinks 0.518        
cufflinks 0.725        
cufflinks 0.751        
cufflinks 0.749        
cufflinks 0.568        
cufflinks 0.714        
cufflinks 0.302       Low
cufflinks 0.426        
cufflinks 0.712        
cufflinks 0.479        
cufflinks 0.88       High
cufflinks 0.485        
cufflinks 0.809       High
cufflinks 0.524        
cufflinks 0.557        
cufflinks 0.161       Low
cufflinks 0.932       High
cufflinks 0.535        
cufflinks 0.426        
cufflinks 0.581        
cufflinks 0.566        
cufflinks 0.412        
cufflinks 6.41972 0.0 77.8924   Low
cufflinks 7.00204 0.0 37.37    
cufflinks 6.42244 0.0 20.156    
cufflinks 3.94062 0.0 35.1754   Low
cufflinks 6.75868 0.0 266.132    

0 Strain