Gene : Cre13.g579250 C. reinhardtii v5.6
Defline:  (1 of 55) PTHR32523//PTHR32523:SF8 - FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC Genomic Order:  400
Name:  ? Cre13.g579250 Secondary Identifier:  ? PAC:30784369
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre13.g579250 0.5kb upstream 0.5kb upstream 4776 true chromosome_13: 2341722-2346497 Chlamydomonas reinhardtii
Cre13.g579250 0.5kb upstream 0.5kb upstream 500 false chromosome_13: 2345998-2346497 Chlamydomonas reinhardtii
Cre13.g579250 0.5kb downstream 0.5kb downstream 4776 true chromosome_13: 2341222-2345997 Chlamydomonas reinhardtii
Cre13.g579250 0.5kb downstream 0.5kb downstream 500 false chromosome_13: 2341222-2341721 Chlamydomonas reinhardtii
Cre13.g579250 1.0kb upstream 1.0kb upstream 5276 true chromosome_13: 2341722-2346997 Chlamydomonas reinhardtii
Cre13.g579250 1.0kb upstream 1.0kb upstream 1000 false chromosome_13: 2345998-2346997 Chlamydomonas reinhardtii
Cre13.g579250 1.0kb downstream 1.0kb downstream 5276 true chromosome_13: 2340722-2345997 Chlamydomonas reinhardtii
Cre13.g579250 1.0kb downstream 1.0kb downstream 1000 false chromosome_13: 2340722-2341721 Chlamydomonas reinhardtii
Cre13.g579250 2.0kb upstream 2.0kb upstream 6276 true chromosome_13: 2341722-2347997 Chlamydomonas reinhardtii
Cre13.g579250 2.0kb upstream 2.0kb upstream 2000 false chromosome_13: 2345998-2347997 Chlamydomonas reinhardtii
Cre13.g579250 2.0kb downstream 2.0kb downstream 6276 true chromosome_13: 2339722-2345997 Chlamydomonas reinhardtii
Cre13.g579250 2.0kb downstream 2.0kb downstream 2000 false chromosome_13: 2339722-2341721 Chlamydomonas reinhardtii
Cre13.g579250 5.0kb upstream 5.0kb upstream 9276 true chromosome_13: 2341722-2350997 Chlamydomonas reinhardtii
Cre13.g579250 5.0kb upstream 5.0kb upstream 5000 false chromosome_13: 2345998-2350997 Chlamydomonas reinhardtii
Cre13.g579250 5.0kb downstream 5.0kb downstream 9276 true chromosome_13: 2336722-2345997 Chlamydomonas reinhardtii
Cre13.g579250 5.0kb downstream 5.0kb downstream 5000 false chromosome_13: 2336722-2341721 Chlamydomonas reinhardtii
Cre13.g579250 10.0kb upstream 10.0kb upstream 14276 true chromosome_13: 2341722-2355997 Chlamydomonas reinhardtii
Cre13.g579250 10.0kb upstream 10.0kb upstream 10000 false chromosome_13: 2345998-2355997 Chlamydomonas reinhardtii
Cre13.g579250 10.0kb downstream 10.0kb downstream 14276 true chromosome_13: 2331722-2345997 Chlamydomonas reinhardtii
Cre13.g579250 10.0kb downstream 10.0kb downstream 10000 false chromosome_13: 2331722-2341721 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124081716 5260 Chlorophyte View MSA
123399430 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.406       Low
cufflinks 1.263        
cufflinks 0.671        
cufflinks 1.037        
cufflinks 0.764        
cufflinks 0.975        
cufflinks 1.424        
cufflinks 1.717       High
cufflinks 0.606        
cufflinks 0.291       Low
cufflinks 0.727        
cufflinks 1.382        
cufflinks 0.519       Low
cufflinks 0.888        
cufflinks 1.0        
cufflinks 0.901        
cufflinks 0.852        
cufflinks 0.815        
cufflinks 0.501       Low
cufflinks 2.226       High
cufflinks 0.829        
cufflinks 0.98        
cufflinks 1.46        
cufflinks 1.822       High
cufflinks 1.23        
cufflinks 2.51453 0.389646 4.63941    
cufflinks 1.36516 0.0 2.7798    
cufflinks 1.26463 0.0 2.92884    
cufflinks 2.39844 0.361762 4.43511    
cufflinks 2.62819 0.350573 4.90581    

0 Strain