Gene : HID1 C. reinhardtii v5.6
Primary Identifier:  ? Cre14.g630859 Defline:  (1 of 1) 1.1.1.31 - 3-hydroxyisobutyrate dehydrogenase
Genomic Order:  524 Name:  ? Cre14.g630859
Secondary Identifier:  ? PAC:30776686
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Creinhardtii VALDEG-PWY Chlamydomonas reinhardtii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre14.g630859 0.5kb upstream 0.5kb upstream 7152 true chromosome_14: 3502305-3509456 Chlamydomonas reinhardtii
Cre14.g630859 0.5kb upstream 0.5kb upstream 500 false chromosome_14: 3502305-3502804 Chlamydomonas reinhardtii
Cre14.g630859 0.5kb downstream 0.5kb downstream 7152 true chromosome_14: 3502805-3509956 Chlamydomonas reinhardtii
Cre14.g630859 0.5kb downstream 0.5kb downstream 500 false chromosome_14: 3509457-3509956 Chlamydomonas reinhardtii
Cre14.g630859 1.0kb upstream 1.0kb upstream 7652 true chromosome_14: 3501805-3509456 Chlamydomonas reinhardtii
Cre14.g630859 1.0kb upstream 1.0kb upstream 1000 false chromosome_14: 3501805-3502804 Chlamydomonas reinhardtii
Cre14.g630859 1.0kb downstream 1.0kb downstream 7652 true chromosome_14: 3502805-3510456 Chlamydomonas reinhardtii
Cre14.g630859 1.0kb downstream 1.0kb downstream 1000 false chromosome_14: 3509457-3510456 Chlamydomonas reinhardtii
Cre14.g630859 2.0kb upstream 2.0kb upstream 8652 true chromosome_14: 3500805-3509456 Chlamydomonas reinhardtii
Cre14.g630859 2.0kb upstream 2.0kb upstream 2000 false chromosome_14: 3500805-3502804 Chlamydomonas reinhardtii
Cre14.g630859 2.0kb downstream 2.0kb downstream 8652 true chromosome_14: 3502805-3511456 Chlamydomonas reinhardtii
Cre14.g630859 2.0kb downstream 2.0kb downstream 2000 false chromosome_14: 3509457-3511456 Chlamydomonas reinhardtii
Cre14.g630859 5.0kb upstream 5.0kb upstream 11652 true chromosome_14: 3497805-3509456 Chlamydomonas reinhardtii
Cre14.g630859 5.0kb upstream 5.0kb upstream 5000 false chromosome_14: 3497805-3502804 Chlamydomonas reinhardtii
Cre14.g630859 5.0kb downstream 5.0kb downstream 11652 true chromosome_14: 3502805-3514456 Chlamydomonas reinhardtii
Cre14.g630859 5.0kb downstream 5.0kb downstream 5000 false chromosome_14: 3509457-3514456 Chlamydomonas reinhardtii
Cre14.g630859 10.0kb upstream 10.0kb upstream 16652 true chromosome_14: 3492805-3509456 Chlamydomonas reinhardtii
Cre14.g630859 10.0kb upstream 10.0kb upstream 10000 false chromosome_14: 3492805-3502804 Chlamydomonas reinhardtii
Cre14.g630859 10.0kb downstream 10.0kb downstream 16652 true chromosome_14: 3502805-3519456 Chlamydomonas reinhardtii
Cre14.g630859 10.0kb downstream 10.0kb downstream 10000 false chromosome_14: 3509457-3519456 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124098135 5260 Chlorophyte View MSA
123424560 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.371        
cufflinks 18.172     High High
cufflinks 20.921     High High
cufflinks 16.582     High  
cufflinks 15.176     High  
cufflinks 13.679     High  
cufflinks 13.347        
cufflinks 7.042        
cufflinks 6.582        
cufflinks 5.731        
cufflinks 15.728     High  
cufflinks 7.32        
cufflinks 5.134        
cufflinks 16.821     High  
cufflinks 7.658        
cufflinks 9.365        
cufflinks 4.241        
cufflinks 17.627     High High
cufflinks 1.374       Low
cufflinks 5.508        
cufflinks 7.99        
cufflinks 1.301       Low
cufflinks 3.294        
cufflinks 8.68        
cufflinks 0.729       Low
cufflinks 14.4344 1.40117 27.4676 High Low
cufflinks 12.9917 3.53573 22.4476    
cufflinks 17.0535 0.0 34.3726    
cufflinks 30.713 0.476205 60.9497 High  
cufflinks 36.7361 4.0033 69.4689 High  

0 Strain