Gene : Cre15.g635200 C. reinhardtii v5.6
Defline:  (1 of 1) PTHR13247 - TETRATRICOPEPTIDE REPEAT PROTEIN 11 TPR REPEAT PROTEIN 11 Genomic Order:  22
Name:  ? Cre15.g635200 Secondary Identifier:  ? PAC:30783701
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre15.g635200 0.5kb upstream 0.5kb upstream 4372 true chromosome_15: 194183-198554 Chlamydomonas reinhardtii
Cre15.g635200 0.5kb upstream 0.5kb upstream 500 false chromosome_15: 194183-194682 Chlamydomonas reinhardtii
Cre15.g635200 0.5kb downstream 0.5kb downstream 4372 true chromosome_15: 194683-199054 Chlamydomonas reinhardtii
Cre15.g635200 0.5kb downstream 0.5kb downstream 500 false chromosome_15: 198555-199054 Chlamydomonas reinhardtii
Cre15.g635200 1.0kb upstream 1.0kb upstream 4872 true chromosome_15: 193683-198554 Chlamydomonas reinhardtii
Cre15.g635200 1.0kb upstream 1.0kb upstream 1000 false chromosome_15: 193683-194682 Chlamydomonas reinhardtii
Cre15.g635200 1.0kb downstream 1.0kb downstream 4872 true chromosome_15: 194683-199554 Chlamydomonas reinhardtii
Cre15.g635200 1.0kb downstream 1.0kb downstream 1000 false chromosome_15: 198555-199554 Chlamydomonas reinhardtii
Cre15.g635200 2.0kb upstream 2.0kb upstream 5872 true chromosome_15: 192683-198554 Chlamydomonas reinhardtii
Cre15.g635200 2.0kb upstream 2.0kb upstream 2000 false chromosome_15: 192683-194682 Chlamydomonas reinhardtii
Cre15.g635200 2.0kb downstream 2.0kb downstream 5872 true chromosome_15: 194683-200554 Chlamydomonas reinhardtii
Cre15.g635200 2.0kb downstream 2.0kb downstream 2000 false chromosome_15: 198555-200554 Chlamydomonas reinhardtii
Cre15.g635200 5.0kb upstream 5.0kb upstream 8872 true chromosome_15: 189683-198554 Chlamydomonas reinhardtii
Cre15.g635200 5.0kb upstream 5.0kb upstream 5000 false chromosome_15: 189683-194682 Chlamydomonas reinhardtii
Cre15.g635200 5.0kb downstream 5.0kb downstream 8872 true chromosome_15: 194683-203554 Chlamydomonas reinhardtii
Cre15.g635200 5.0kb downstream 5.0kb downstream 5000 false chromosome_15: 198555-203554 Chlamydomonas reinhardtii
Cre15.g635200 10.0kb upstream 10.0kb upstream 13872 true chromosome_15: 184683-198554 Chlamydomonas reinhardtii
Cre15.g635200 10.0kb upstream 10.0kb upstream 10000 false chromosome_15: 184683-194682 Chlamydomonas reinhardtii
Cre15.g635200 10.0kb downstream 10.0kb downstream 13872 true chromosome_15: 194683-208554 Chlamydomonas reinhardtii
Cre15.g635200 10.0kb downstream 10.0kb downstream 10000 false chromosome_15: 198555-208554 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124108869 5260 Chlorophyte View MSA
123429111 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.524        
cufflinks 3.9       High
cufflinks 3.089        
cufflinks 3.265        
cufflinks 3.054        
cufflinks 3.258        
cufflinks 2.403        
cufflinks 2.935        
cufflinks 2.689        
cufflinks 1.208       Low
cufflinks 1.893        
cufflinks 2.257        
cufflinks 2.459        
cufflinks 3.261        
cufflinks 2.173        
cufflinks 2.717        
cufflinks 3.282        
cufflinks 4.323       High
cufflinks 0.554       Low
cufflinks 2.348        
cufflinks 2.212        
cufflinks 2.889        
cufflinks 1.679        
cufflinks 2.785        
cufflinks 3.63        
cufflinks 23.593 2.03648 45.1496   High
cufflinks 9.94449 2.60177 17.2872   High
cufflinks 4.32 0.0 9.28568    
cufflinks 6.21372 1.02634 11.4011    
cufflinks 7.24318 1.39028 13.0961    

0 Strain