Gene : CPN2 C. reinhardtii v5.6
Primary Identifier:  ? Cre15.g636300 Defline:  (1 of 1) K17262 - tubulin-folding cofactor B (TBCB, CKAP1, ALF1)
Genomic Order:  52 Name:  ? Cre15.g636300
Secondary Identifier:  ? PAC:30783533
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre15.g636300 0.5kb upstream 0.5kb upstream 5222 true chromosome_15: 427843-433064 Chlamydomonas reinhardtii
Cre15.g636300 0.5kb upstream 0.5kb upstream 500 false chromosome_15: 427843-428342 Chlamydomonas reinhardtii
Cre15.g636300 0.5kb downstream 0.5kb downstream 5222 true chromosome_15: 428343-433564 Chlamydomonas reinhardtii
Cre15.g636300 0.5kb downstream 0.5kb downstream 500 false chromosome_15: 433065-433564 Chlamydomonas reinhardtii
Cre15.g636300 1.0kb upstream 1.0kb upstream 5722 true chromosome_15: 427343-433064 Chlamydomonas reinhardtii
Cre15.g636300 1.0kb upstream 1.0kb upstream 1000 false chromosome_15: 427343-428342 Chlamydomonas reinhardtii
Cre15.g636300 1.0kb downstream 1.0kb downstream 5722 true chromosome_15: 428343-434064 Chlamydomonas reinhardtii
Cre15.g636300 1.0kb downstream 1.0kb downstream 1000 false chromosome_15: 433065-434064 Chlamydomonas reinhardtii
Cre15.g636300 2.0kb upstream 2.0kb upstream 6722 true chromosome_15: 426343-433064 Chlamydomonas reinhardtii
Cre15.g636300 2.0kb upstream 2.0kb upstream 2000 false chromosome_15: 426343-428342 Chlamydomonas reinhardtii
Cre15.g636300 2.0kb downstream 2.0kb downstream 6722 true chromosome_15: 428343-435064 Chlamydomonas reinhardtii
Cre15.g636300 2.0kb downstream 2.0kb downstream 2000 false chromosome_15: 433065-435064 Chlamydomonas reinhardtii
Cre15.g636300 5.0kb upstream 5.0kb upstream 9722 true chromosome_15: 423343-433064 Chlamydomonas reinhardtii
Cre15.g636300 5.0kb upstream 5.0kb upstream 5000 false chromosome_15: 423343-428342 Chlamydomonas reinhardtii
Cre15.g636300 5.0kb downstream 5.0kb downstream 9722 true chromosome_15: 428343-438064 Chlamydomonas reinhardtii
Cre15.g636300 5.0kb downstream 5.0kb downstream 5000 false chromosome_15: 433065-438064 Chlamydomonas reinhardtii
Cre15.g636300 10.0kb upstream 10.0kb upstream 14722 true chromosome_15: 418343-433064 Chlamydomonas reinhardtii
Cre15.g636300 10.0kb upstream 10.0kb upstream 10000 false chromosome_15: 418343-428342 Chlamydomonas reinhardtii
Cre15.g636300 10.0kb downstream 10.0kb downstream 14722 true chromosome_15: 428343-443064 Chlamydomonas reinhardtii
Cre15.g636300 10.0kb downstream 10.0kb downstream 10000 false chromosome_15: 433065-443064 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124111140 5260 Chlorophyte View MSA
123423760 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.002       Low
cufflinks 7.676        
cufflinks 10.733        
cufflinks 8.304        
cufflinks 6.751        
cufflinks 7.734        
cufflinks 12.35       High
cufflinks 8.899        
cufflinks 1.21       Low
cufflinks 2.986        
cufflinks 7.534        
cufflinks 7.442        
cufflinks 4.464        
cufflinks 8.22        
cufflinks 5.009        
cufflinks 2.205        
cufflinks 1.208       Low
cufflinks 8.213        
cufflinks 1.741        
cufflinks 7.695        
cufflinks 4.355        
cufflinks 0.457       Low
cufflinks 9.217        
cufflinks 6.518        
cufflinks 0.571       Low
cufflinks 5.56103 0.868838 10.2532    
cufflinks 5.00823 1.28338 8.73307    
cufflinks 6.40023 0.0 12.8771    
cufflinks 5.63113 0.858387 10.4039    
cufflinks 9.34106 1.81109 16.871    

0 Strain