Gene : Cre16.g658300 C. reinhardtii v5.6
Genomic Order:  359 Name:  ? Cre16.g658300
Secondary Identifier:  ? PAC:30777441
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre16.g658300 0.5kb upstream 0.5kb upstream 6232 true chromosome_16: 2180079-2186310 Chlamydomonas reinhardtii
Cre16.g658300 0.5kb upstream 0.5kb upstream 500 false chromosome_16: 2180079-2180578 Chlamydomonas reinhardtii
Cre16.g658300 0.5kb downstream 0.5kb downstream 6232 true chromosome_16: 2180579-2186810 Chlamydomonas reinhardtii
Cre16.g658300 0.5kb downstream 0.5kb downstream 500 false chromosome_16: 2186311-2186810 Chlamydomonas reinhardtii
Cre16.g658300 1.0kb upstream 1.0kb upstream 6732 true chromosome_16: 2179579-2186310 Chlamydomonas reinhardtii
Cre16.g658300 1.0kb upstream 1.0kb upstream 1000 false chromosome_16: 2179579-2180578 Chlamydomonas reinhardtii
Cre16.g658300 1.0kb downstream 1.0kb downstream 6732 true chromosome_16: 2180579-2187310 Chlamydomonas reinhardtii
Cre16.g658300 1.0kb downstream 1.0kb downstream 1000 false chromosome_16: 2186311-2187310 Chlamydomonas reinhardtii
Cre16.g658300 2.0kb upstream 2.0kb upstream 7732 true chromosome_16: 2178579-2186310 Chlamydomonas reinhardtii
Cre16.g658300 2.0kb upstream 2.0kb upstream 2000 false chromosome_16: 2178579-2180578 Chlamydomonas reinhardtii
Cre16.g658300 2.0kb downstream 2.0kb downstream 7732 true chromosome_16: 2180579-2188310 Chlamydomonas reinhardtii
Cre16.g658300 2.0kb downstream 2.0kb downstream 2000 false chromosome_16: 2186311-2188310 Chlamydomonas reinhardtii
Cre16.g658300 5.0kb upstream 5.0kb upstream 10732 true chromosome_16: 2175579-2186310 Chlamydomonas reinhardtii
Cre16.g658300 5.0kb upstream 5.0kb upstream 5000 false chromosome_16: 2175579-2180578 Chlamydomonas reinhardtii
Cre16.g658300 5.0kb downstream 5.0kb downstream 10732 true chromosome_16: 2180579-2191310 Chlamydomonas reinhardtii
Cre16.g658300 5.0kb downstream 5.0kb downstream 5000 false chromosome_16: 2186311-2191310 Chlamydomonas reinhardtii
Cre16.g658300 10.0kb upstream 10.0kb upstream 15732 true chromosome_16: 2170579-2186310 Chlamydomonas reinhardtii
Cre16.g658300 10.0kb upstream 10.0kb upstream 10000 false chromosome_16: 2170579-2180578 Chlamydomonas reinhardtii
Cre16.g658300 10.0kb downstream 10.0kb downstream 15732 true chromosome_16: 2180579-2196310 Chlamydomonas reinhardtii
Cre16.g658300 10.0kb downstream 10.0kb downstream 10000 false chromosome_16: 2186311-2196310 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124077230 5260 Chlorophyte Singleton cluster - no MSA
123395252 5275 Viridiplantae Singleton cluster - no MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.105     Low  
cufflinks 0.091     Low  
cufflinks 0.074     Low  
cufflinks 0.03     Low  
cufflinks 0.048     Low  
cufflinks 0.069     Low  
cufflinks 0.075     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low Low
cufflinks 0.022     Low  
cufflinks 0.033     Low  
cufflinks 0.034     Low  
cufflinks 0.04     Low  
cufflinks 0.037     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.053     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.001     Low Low
cufflinks 0.008     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.106     Low High
cufflinks 0.029     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.233156 0.0 0.537725   Low
cufflinks 0.385947 0.0 1.05986 Low  
cufflinks 0.474049 0.0 1.35671    
cufflinks 0.374842 0.0 0.83965    
cufflinks 1.13053 0.0 2.36914    

0 Strain