Gene : CCD3 C. reinhardtii v5.6
Primary Identifier:  ? Cre16.g657800 Defline:  (1 of 2) K00464 - all-trans-8'-apo-beta-carotenal 15,15'-oxygenase (diox1)
Genomic Order:  348 Name:  ? Cre16.g657800
Secondary Identifier:  ? PAC:30777499
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre16.g657800 0.5kb upstream 0.5kb upstream 6214 true chromosome_16: 2103546-2109759 Chlamydomonas reinhardtii
Cre16.g657800 0.5kb upstream 0.5kb upstream 500 false chromosome_16: 2103546-2104045 Chlamydomonas reinhardtii
Cre16.g657800 0.5kb downstream 0.5kb downstream 6214 true chromosome_16: 2104046-2110259 Chlamydomonas reinhardtii
Cre16.g657800 0.5kb downstream 0.5kb downstream 500 false chromosome_16: 2109760-2110259 Chlamydomonas reinhardtii
Cre16.g657800 1.0kb upstream 1.0kb upstream 6714 true chromosome_16: 2103046-2109759 Chlamydomonas reinhardtii
Cre16.g657800 1.0kb upstream 1.0kb upstream 1000 false chromosome_16: 2103046-2104045 Chlamydomonas reinhardtii
Cre16.g657800 1.0kb downstream 1.0kb downstream 6714 true chromosome_16: 2104046-2110759 Chlamydomonas reinhardtii
Cre16.g657800 1.0kb downstream 1.0kb downstream 1000 false chromosome_16: 2109760-2110759 Chlamydomonas reinhardtii
Cre16.g657800 2.0kb upstream 2.0kb upstream 7714 true chromosome_16: 2102046-2109759 Chlamydomonas reinhardtii
Cre16.g657800 2.0kb upstream 2.0kb upstream 2000 false chromosome_16: 2102046-2104045 Chlamydomonas reinhardtii
Cre16.g657800 2.0kb downstream 2.0kb downstream 7714 true chromosome_16: 2104046-2111759 Chlamydomonas reinhardtii
Cre16.g657800 2.0kb downstream 2.0kb downstream 2000 false chromosome_16: 2109760-2111759 Chlamydomonas reinhardtii
Cre16.g657800 5.0kb upstream 5.0kb upstream 10714 true chromosome_16: 2099046-2109759 Chlamydomonas reinhardtii
Cre16.g657800 5.0kb upstream 5.0kb upstream 5000 false chromosome_16: 2099046-2104045 Chlamydomonas reinhardtii
Cre16.g657800 5.0kb downstream 5.0kb downstream 10714 true chromosome_16: 2104046-2114759 Chlamydomonas reinhardtii
Cre16.g657800 5.0kb downstream 5.0kb downstream 5000 false chromosome_16: 2109760-2114759 Chlamydomonas reinhardtii
Cre16.g657800 10.0kb upstream 10.0kb upstream 15714 true chromosome_16: 2094046-2109759 Chlamydomonas reinhardtii
Cre16.g657800 10.0kb upstream 10.0kb upstream 10000 false chromosome_16: 2094046-2104045 Chlamydomonas reinhardtii
Cre16.g657800 10.0kb downstream 10.0kb downstream 15714 true chromosome_16: 2104046-2119759 Chlamydomonas reinhardtii
Cre16.g657800 10.0kb downstream 10.0kb downstream 10000 false chromosome_16: 2109760-2119759 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124109591 5260 Chlorophyte View MSA
123428919 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.174       Low
cufflinks 1.415        
cufflinks 1.956        
cufflinks 2.727        
cufflinks 1.326        
cufflinks 1.818        
cufflinks 1.577        
cufflinks 3.304       High
cufflinks 1.34        
cufflinks 1.314        
cufflinks 1.548        
cufflinks 2.273        
cufflinks 4.267       High
cufflinks 2.024        
cufflinks 1.309        
cufflinks 2.222        
cufflinks 2.682        
cufflinks 2.28        
cufflinks 0.547       Low
cufflinks 2.332        
cufflinks 1.669        
cufflinks 2.074        
cufflinks 1.975        
cufflinks 4.38       High
cufflinks 2.736        
cufflinks 15.0308 1.44263 28.619    
cufflinks 4.60501 0.823515 8.38651    
cufflinks 7.79586 0.0 15.7769    
cufflinks 1.99645 0.159591 3.8333   Low
cufflinks 5.37671 0.973704 9.77972    

0 Strain