Gene : Cre16.g662250 C. reinhardtii v5.6
Defline:  (1 of 1) PTHR12106 - SORTILIN RELATED Genomic Order:  446
Name:  ? Cre16.g662250 Secondary Identifier:  ? PAC:30777116
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre16.g662250 0.5kb upstream 0.5kb upstream 11646 true chromosome_16: 2681509-2693154 Chlamydomonas reinhardtii
Cre16.g662250 0.5kb upstream 0.5kb upstream 500 false chromosome_16: 2692655-2693154 Chlamydomonas reinhardtii
Cre16.g662250 0.5kb downstream 0.5kb downstream 11646 true chromosome_16: 2681009-2692654 Chlamydomonas reinhardtii
Cre16.g662250 0.5kb downstream 0.5kb downstream 500 false chromosome_16: 2681009-2681508 Chlamydomonas reinhardtii
Cre16.g662250 1.0kb upstream 1.0kb upstream 12146 true chromosome_16: 2681509-2693654 Chlamydomonas reinhardtii
Cre16.g662250 1.0kb upstream 1.0kb upstream 1000 false chromosome_16: 2692655-2693654 Chlamydomonas reinhardtii
Cre16.g662250 1.0kb downstream 1.0kb downstream 12146 true chromosome_16: 2680509-2692654 Chlamydomonas reinhardtii
Cre16.g662250 1.0kb downstream 1.0kb downstream 1000 false chromosome_16: 2680509-2681508 Chlamydomonas reinhardtii
Cre16.g662250 2.0kb upstream 2.0kb upstream 13146 true chromosome_16: 2681509-2694654 Chlamydomonas reinhardtii
Cre16.g662250 2.0kb upstream 2.0kb upstream 2000 false chromosome_16: 2692655-2694654 Chlamydomonas reinhardtii
Cre16.g662250 2.0kb downstream 2.0kb downstream 13146 true chromosome_16: 2679509-2692654 Chlamydomonas reinhardtii
Cre16.g662250 2.0kb downstream 2.0kb downstream 2000 false chromosome_16: 2679509-2681508 Chlamydomonas reinhardtii
Cre16.g662250 5.0kb upstream 5.0kb upstream 16146 true chromosome_16: 2681509-2697654 Chlamydomonas reinhardtii
Cre16.g662250 5.0kb upstream 5.0kb upstream 5000 false chromosome_16: 2692655-2697654 Chlamydomonas reinhardtii
Cre16.g662250 5.0kb downstream 5.0kb downstream 16146 true chromosome_16: 2676509-2692654 Chlamydomonas reinhardtii
Cre16.g662250 5.0kb downstream 5.0kb downstream 5000 false chromosome_16: 2676509-2681508 Chlamydomonas reinhardtii
Cre16.g662250 10.0kb upstream 10.0kb upstream 21146 true chromosome_16: 2681509-2702654 Chlamydomonas reinhardtii
Cre16.g662250 10.0kb upstream 10.0kb upstream 10000 false chromosome_16: 2692655-2702654 Chlamydomonas reinhardtii
Cre16.g662250 10.0kb downstream 10.0kb downstream 21146 true chromosome_16: 2671509-2692654 Chlamydomonas reinhardtii
Cre16.g662250 10.0kb downstream 10.0kb downstream 10000 false chromosome_16: 2671509-2681508 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124109856 5260 Chlorophyte View MSA
123423004 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.54       Low
cufflinks 4.107        
cufflinks 4.007        
cufflinks 4.492        
cufflinks 3.939        
cufflinks 3.633        
cufflinks 4.29        
cufflinks 5.801       High
cufflinks 2.035        
cufflinks 0.924       Low
cufflinks 4.625        
cufflinks 4.473        
cufflinks 1.867       Low
cufflinks 4.559        
cufflinks 2.794        
cufflinks 2.76        
cufflinks 3.351        
cufflinks 3.721        
cufflinks 0.874       Low
cufflinks 5.672       High
cufflinks 3.244        
cufflinks 2.506        
cufflinks 3.97        
cufflinks 5.967       High
cufflinks 3.094        
cufflinks 23.465 0.121637 46.8083    
cufflinks 21.9074 5.21306 38.6018    
cufflinks 24.8947 0.0 50.9255    
cufflinks 14.1056 0.814919 27.3963    
cufflinks 20.2626 2.7537 37.7716    

0 Strain