Gene : LCI11B C. reinhardtii v5.6
Primary Identifier:  ? Cre16.g663450 Defline:  (1 of 10) PF01062 - Bestrophin, RFP-TM, chloride channel (Bestrophin)
Genomic Order:  471 Name:  ? Cre16.g663450
Secondary Identifier:  ? PAC:30778050
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre16.g663450 0.5kb upstream 0.5kb upstream 4346 true chromosome_16: 2845854-2850199 Chlamydomonas reinhardtii
Cre16.g663450 0.5kb upstream 0.5kb upstream 500 false chromosome_16: 2849700-2850199 Chlamydomonas reinhardtii
Cre16.g663450 0.5kb downstream 0.5kb downstream 4346 true chromosome_16: 2845354-2849699 Chlamydomonas reinhardtii
Cre16.g663450 0.5kb downstream 0.5kb downstream 500 false chromosome_16: 2845354-2845853 Chlamydomonas reinhardtii
Cre16.g663450 1.0kb upstream 1.0kb upstream 4846 true chromosome_16: 2845854-2850699 Chlamydomonas reinhardtii
Cre16.g663450 1.0kb upstream 1.0kb upstream 1000 false chromosome_16: 2849700-2850699 Chlamydomonas reinhardtii
Cre16.g663450 1.0kb downstream 1.0kb downstream 4846 true chromosome_16: 2844854-2849699 Chlamydomonas reinhardtii
Cre16.g663450 1.0kb downstream 1.0kb downstream 1000 false chromosome_16: 2844854-2845853 Chlamydomonas reinhardtii
Cre16.g663450 2.0kb upstream 2.0kb upstream 5846 true chromosome_16: 2845854-2851699 Chlamydomonas reinhardtii
Cre16.g663450 2.0kb upstream 2.0kb upstream 2000 false chromosome_16: 2849700-2851699 Chlamydomonas reinhardtii
Cre16.g663450 2.0kb downstream 2.0kb downstream 5846 true chromosome_16: 2843854-2849699 Chlamydomonas reinhardtii
Cre16.g663450 2.0kb downstream 2.0kb downstream 2000 false chromosome_16: 2843854-2845853 Chlamydomonas reinhardtii
Cre16.g663450 5.0kb upstream 5.0kb upstream 8846 true chromosome_16: 2845854-2854699 Chlamydomonas reinhardtii
Cre16.g663450 5.0kb upstream 5.0kb upstream 5000 false chromosome_16: 2849700-2854699 Chlamydomonas reinhardtii
Cre16.g663450 5.0kb downstream 5.0kb downstream 8846 true chromosome_16: 2840854-2849699 Chlamydomonas reinhardtii
Cre16.g663450 5.0kb downstream 5.0kb downstream 5000 false chromosome_16: 2840854-2845853 Chlamydomonas reinhardtii
Cre16.g663450 10.0kb upstream 10.0kb upstream 13846 true chromosome_16: 2845854-2859699 Chlamydomonas reinhardtii
Cre16.g663450 10.0kb upstream 10.0kb upstream 10000 false chromosome_16: 2849700-2859699 Chlamydomonas reinhardtii
Cre16.g663450 10.0kb downstream 10.0kb downstream 13846 true chromosome_16: 2835854-2849699 Chlamydomonas reinhardtii
Cre16.g663450 10.0kb downstream 10.0kb downstream 10000 false chromosome_16: 2835854-2845853 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124113433 5260 Chlorophyte View MSA
123427884 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 62.728     High  
cufflinks 46.866     High  
cufflinks 51.027     High  
cufflinks 63.773     High  
cufflinks 92.232     High  
cufflinks 38.566     High  
cufflinks 39.446     High  
cufflinks 48.773     High  
cufflinks 105.728     High  
cufflinks 29.02     High  
cufflinks 7.544     High Low
cufflinks 69.879     High  
cufflinks 101.915     High  
cufflinks 64.926     High  
cufflinks 22.914     High Low
cufflinks 90.483     High  
cufflinks 25.608     High Low
cufflinks 179.678     High High
cufflinks 19.67     High Low
cufflinks 56.241     High  
cufflinks 77.273     High  
cufflinks 207.556     High High
cufflinks 24.629     High Low
cufflinks 107.533     High  
cufflinks 222.766     High High
cufflinks 0.836929 0.0 1.69045 High High
cufflinks 23.884 6.11689 41.6511    
cufflinks 147.906 0.0 311.569 High  
cufflinks 21.4499 0.824251 42.0755   High
cufflinks 6.05387 1.19323 10.9145   Low

0 Strain