Gene : LCI11A C. reinhardtii v5.6
Primary Identifier:  ? Cre16.g663400 Defline:  (1 of 10) PF01062 - Bestrophin, RFP-TM, chloride channel (Bestrophin)
Genomic Order:  470 Name:  ? Cre16.g663400
Secondary Identifier:  ? PAC:30777715
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre16.g663400 0.5kb upstream 0.5kb upstream 5660 true chromosome_16: 2840640-2846299 Chlamydomonas reinhardtii
Cre16.g663400 0.5kb upstream 0.5kb upstream 500 false chromosome_16: 2845800-2846299 Chlamydomonas reinhardtii
Cre16.g663400 0.5kb downstream 0.5kb downstream 5660 true chromosome_16: 2840140-2845799 Chlamydomonas reinhardtii
Cre16.g663400 0.5kb downstream 0.5kb downstream 500 false chromosome_16: 2840140-2840639 Chlamydomonas reinhardtii
Cre16.g663400 1.0kb upstream 1.0kb upstream 6160 true chromosome_16: 2840640-2846799 Chlamydomonas reinhardtii
Cre16.g663400 1.0kb upstream 1.0kb upstream 1000 false chromosome_16: 2845800-2846799 Chlamydomonas reinhardtii
Cre16.g663400 1.0kb downstream 1.0kb downstream 6160 true chromosome_16: 2839640-2845799 Chlamydomonas reinhardtii
Cre16.g663400 1.0kb downstream 1.0kb downstream 1000 false chromosome_16: 2839640-2840639 Chlamydomonas reinhardtii
Cre16.g663400 2.0kb upstream 2.0kb upstream 7160 true chromosome_16: 2840640-2847799 Chlamydomonas reinhardtii
Cre16.g663400 2.0kb upstream 2.0kb upstream 2000 false chromosome_16: 2845800-2847799 Chlamydomonas reinhardtii
Cre16.g663400 2.0kb downstream 2.0kb downstream 7160 true chromosome_16: 2838640-2845799 Chlamydomonas reinhardtii
Cre16.g663400 2.0kb downstream 2.0kb downstream 2000 false chromosome_16: 2838640-2840639 Chlamydomonas reinhardtii
Cre16.g663400 5.0kb upstream 5.0kb upstream 10160 true chromosome_16: 2840640-2850799 Chlamydomonas reinhardtii
Cre16.g663400 5.0kb upstream 5.0kb upstream 5000 false chromosome_16: 2845800-2850799 Chlamydomonas reinhardtii
Cre16.g663400 5.0kb downstream 5.0kb downstream 10160 true chromosome_16: 2835640-2845799 Chlamydomonas reinhardtii
Cre16.g663400 5.0kb downstream 5.0kb downstream 5000 false chromosome_16: 2835640-2840639 Chlamydomonas reinhardtii
Cre16.g663400 10.0kb upstream 10.0kb upstream 15160 true chromosome_16: 2840640-2855799 Chlamydomonas reinhardtii
Cre16.g663400 10.0kb upstream 10.0kb upstream 10000 false chromosome_16: 2845800-2855799 Chlamydomonas reinhardtii
Cre16.g663400 10.0kb downstream 10.0kb downstream 15160 true chromosome_16: 2830640-2845799 Chlamydomonas reinhardtii
Cre16.g663400 10.0kb downstream 10.0kb downstream 10000 false chromosome_16: 2830640-2840639 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124113433 5260 Chlorophyte View MSA
123427884 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.152     High  
cufflinks 19.04     High  
cufflinks 3.624       Low
cufflinks 8.693        
cufflinks 14.841     High  
cufflinks 9.191        
cufflinks 19.439     High  
cufflinks 13.84        
cufflinks 13.617     High  
cufflinks 6.47       Low
cufflinks 6.314       Low
cufflinks 20.33     High  
cufflinks 2.921       Low
cufflinks 11.083        
cufflinks 14.123     High  
cufflinks 17.339     High  
cufflinks 23.997     High High
cufflinks 6.444       Low
cufflinks 7.909     High  
cufflinks 27.61     High High
cufflinks 14.636     High  
cufflinks 31.518     High High
cufflinks 15.644     High  
cufflinks 12.647        
cufflinks 29.362     High High
cufflinks 73.1782 0.0 154.727 High High
cufflinks 31.6847 2.66985 60.6995 High  
cufflinks 79.6423 0.0 176.371 High  
cufflinks 41.6908 0.0 90.7635 High  
cufflinks 44.6616 2.63004 86.6932 High High

0 Strain