Gene : RYR1 C. reinhardtii v5.6
Primary Identifier:  ? Cre16.g665450 Defline:  (1 of 1) K04958 - inositol 1,4,5-triphosphate receptor type 1 (ITPR1)
Genomic Order:  512 Name:  ? Cre16.g665450
Secondary Identifier:  ? PAC:30777802
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre16.g665450 0.5kb upstream 0.5kb upstream 19356 true chromosome_16: 3086226-3105581 Chlamydomonas reinhardtii
Cre16.g665450 0.5kb upstream 0.5kb upstream 500 false chromosome_16: 3086226-3086725 Chlamydomonas reinhardtii
Cre16.g665450 0.5kb downstream 0.5kb downstream 19356 true chromosome_16: 3086726-3106081 Chlamydomonas reinhardtii
Cre16.g665450 0.5kb downstream 0.5kb downstream 500 false chromosome_16: 3105582-3106081 Chlamydomonas reinhardtii
Cre16.g665450 1.0kb upstream 1.0kb upstream 19856 true chromosome_16: 3085726-3105581 Chlamydomonas reinhardtii
Cre16.g665450 1.0kb upstream 1.0kb upstream 1000 false chromosome_16: 3085726-3086725 Chlamydomonas reinhardtii
Cre16.g665450 1.0kb downstream 1.0kb downstream 19856 true chromosome_16: 3086726-3106581 Chlamydomonas reinhardtii
Cre16.g665450 1.0kb downstream 1.0kb downstream 1000 false chromosome_16: 3105582-3106581 Chlamydomonas reinhardtii
Cre16.g665450 2.0kb upstream 2.0kb upstream 20856 true chromosome_16: 3084726-3105581 Chlamydomonas reinhardtii
Cre16.g665450 2.0kb upstream 2.0kb upstream 2000 false chromosome_16: 3084726-3086725 Chlamydomonas reinhardtii
Cre16.g665450 2.0kb downstream 2.0kb downstream 20856 true chromosome_16: 3086726-3107581 Chlamydomonas reinhardtii
Cre16.g665450 2.0kb downstream 2.0kb downstream 2000 false chromosome_16: 3105582-3107581 Chlamydomonas reinhardtii
Cre16.g665450 5.0kb upstream 5.0kb upstream 23856 true chromosome_16: 3081726-3105581 Chlamydomonas reinhardtii
Cre16.g665450 5.0kb upstream 5.0kb upstream 5000 false chromosome_16: 3081726-3086725 Chlamydomonas reinhardtii
Cre16.g665450 5.0kb downstream 5.0kb downstream 23856 true chromosome_16: 3086726-3110581 Chlamydomonas reinhardtii
Cre16.g665450 5.0kb downstream 5.0kb downstream 5000 false chromosome_16: 3105582-3110581 Chlamydomonas reinhardtii
Cre16.g665450 10.0kb upstream 10.0kb upstream 28856 true chromosome_16: 3076726-3105581 Chlamydomonas reinhardtii
Cre16.g665450 10.0kb upstream 10.0kb upstream 10000 false chromosome_16: 3076726-3086725 Chlamydomonas reinhardtii
Cre16.g665450 10.0kb downstream 10.0kb downstream 28856 true chromosome_16: 3086726-3115581 Chlamydomonas reinhardtii
Cre16.g665450 10.0kb downstream 10.0kb downstream 10000 false chromosome_16: 3105582-3115581 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124077354 5260 Chlorophyte Singleton cluster - no MSA
123395369 5275 Viridiplantae Singleton cluster - no MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.644       Low
cufflinks 3.1        
cufflinks 4.44        
cufflinks 6.869       High
cufflinks 2.233        
cufflinks 2.305        
cufflinks 3.182        
cufflinks 4.018        
cufflinks 0.523       Low
cufflinks 0.94       Low
cufflinks 9.325       High
cufflinks 4.053        
cufflinks 1.186        
cufflinks 2.382        
cufflinks 4.581        
cufflinks 0.861       Low
cufflinks 1.244        
cufflinks 3.314        
cufflinks 0.755       Low
cufflinks 4.049        
cufflinks 5.089       High
cufflinks 1.009       Low
cufflinks 3.538        
cufflinks 3.457        
cufflinks 0.978       Low
cufflinks 3.5834 0.229202 6.93759   High
cufflinks 4.76793 1.2741 8.26175    
cufflinks 8.14634 0.0 16.7398    
cufflinks 5.89417 0.0605159 11.7278   High
cufflinks 6.88717 0.848457 12.9259    

0 Strain