Gene : Cre16.g668000 C. reinhardtii v5.6
Genomic Order:  707 Name:  ? Cre16.g668000
Secondary Identifier:  ? PAC:30778256
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre16.g668000 0.5kb upstream 0.5kb upstream 3732 true chromosome_16: 4288346-4292077 Chlamydomonas reinhardtii
Cre16.g668000 0.5kb upstream 0.5kb upstream 500 false chromosome_16: 4288346-4288845 Chlamydomonas reinhardtii
Cre16.g668000 0.5kb downstream 0.5kb downstream 3732 true chromosome_16: 4288846-4292577 Chlamydomonas reinhardtii
Cre16.g668000 0.5kb downstream 0.5kb downstream 500 false chromosome_16: 4292078-4292577 Chlamydomonas reinhardtii
Cre16.g668000 1.0kb upstream 1.0kb upstream 4232 true chromosome_16: 4287846-4292077 Chlamydomonas reinhardtii
Cre16.g668000 1.0kb upstream 1.0kb upstream 1000 false chromosome_16: 4287846-4288845 Chlamydomonas reinhardtii
Cre16.g668000 1.0kb downstream 1.0kb downstream 4232 true chromosome_16: 4288846-4293077 Chlamydomonas reinhardtii
Cre16.g668000 1.0kb downstream 1.0kb downstream 1000 false chromosome_16: 4292078-4293077 Chlamydomonas reinhardtii
Cre16.g668000 2.0kb upstream 2.0kb upstream 5232 true chromosome_16: 4286846-4292077 Chlamydomonas reinhardtii
Cre16.g668000 2.0kb upstream 2.0kb upstream 2000 false chromosome_16: 4286846-4288845 Chlamydomonas reinhardtii
Cre16.g668000 2.0kb downstream 2.0kb downstream 5232 true chromosome_16: 4288846-4294077 Chlamydomonas reinhardtii
Cre16.g668000 2.0kb downstream 2.0kb downstream 2000 false chromosome_16: 4292078-4294077 Chlamydomonas reinhardtii
Cre16.g668000 5.0kb upstream 5.0kb upstream 8232 true chromosome_16: 4283846-4292077 Chlamydomonas reinhardtii
Cre16.g668000 5.0kb upstream 5.0kb upstream 5000 false chromosome_16: 4283846-4288845 Chlamydomonas reinhardtii
Cre16.g668000 5.0kb downstream 5.0kb downstream 8232 true chromosome_16: 4288846-4297077 Chlamydomonas reinhardtii
Cre16.g668000 5.0kb downstream 5.0kb downstream 5000 false chromosome_16: 4292078-4297077 Chlamydomonas reinhardtii
Cre16.g668000 10.0kb upstream 10.0kb upstream 13232 true chromosome_16: 4278846-4292077 Chlamydomonas reinhardtii
Cre16.g668000 10.0kb upstream 10.0kb upstream 10000 false chromosome_16: 4278846-4288845 Chlamydomonas reinhardtii
Cre16.g668000 10.0kb downstream 10.0kb downstream 13232 true chromosome_16: 4288846-4302077 Chlamydomonas reinhardtii
Cre16.g668000 10.0kb downstream 10.0kb downstream 10000 false chromosome_16: 4292078-4302077 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124110078 5260 Chlorophyte View MSA
123428462 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.952       Low
cufflinks 4.021       High
cufflinks 3.991       High
cufflinks 2.936        
cufflinks 2.777        
cufflinks 2.54        
cufflinks 4.734       High
cufflinks 3.324        
cufflinks 0.74       Low
cufflinks 3.273        
cufflinks 1.583        
cufflinks 2.27        
cufflinks 2.513        
cufflinks 2.648        
cufflinks 2.548        
cufflinks 1.146       Low
cufflinks 0.896       Low
cufflinks 3.153        
cufflinks 2.852        
cufflinks 2.649        
cufflinks 1.452        
cufflinks 1.459        
cufflinks 5.79       High
cufflinks 1.913        
cufflinks 0.949       Low
cufflinks 0.99143 0.0 2.0386   High
cufflinks 0.625541 0.0 1.50122   Low
cufflinks 1.61984 0.0 3.8612    
cufflinks 1.65414 0.0502227 3.25807    
cufflinks 2.72731 0.111378 5.34325   High

0 Strain