Gene : Cre16.g669050 C. reinhardtii v5.6
Genomic Order:  683 Name:  ? Cre16.g669050
Secondary Identifier:  ? PAC:30777461
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre16.g669050 0.5kb upstream 0.5kb upstream 6416 true chromosome_16: 4151320-4157735 Chlamydomonas reinhardtii
Cre16.g669050 0.5kb upstream 0.5kb upstream 500 false chromosome_16: 4157236-4157735 Chlamydomonas reinhardtii
Cre16.g669050 0.5kb downstream 0.5kb downstream 6416 true chromosome_16: 4150820-4157235 Chlamydomonas reinhardtii
Cre16.g669050 0.5kb downstream 0.5kb downstream 500 false chromosome_16: 4150820-4151319 Chlamydomonas reinhardtii
Cre16.g669050 1.0kb upstream 1.0kb upstream 6916 true chromosome_16: 4151320-4158235 Chlamydomonas reinhardtii
Cre16.g669050 1.0kb upstream 1.0kb upstream 1000 false chromosome_16: 4157236-4158235 Chlamydomonas reinhardtii
Cre16.g669050 1.0kb downstream 1.0kb downstream 6916 true chromosome_16: 4150320-4157235 Chlamydomonas reinhardtii
Cre16.g669050 1.0kb downstream 1.0kb downstream 1000 false chromosome_16: 4150320-4151319 Chlamydomonas reinhardtii
Cre16.g669050 2.0kb upstream 2.0kb upstream 7916 true chromosome_16: 4151320-4159235 Chlamydomonas reinhardtii
Cre16.g669050 2.0kb upstream 2.0kb upstream 2000 false chromosome_16: 4157236-4159235 Chlamydomonas reinhardtii
Cre16.g669050 2.0kb downstream 2.0kb downstream 7916 true chromosome_16: 4149320-4157235 Chlamydomonas reinhardtii
Cre16.g669050 2.0kb downstream 2.0kb downstream 2000 false chromosome_16: 4149320-4151319 Chlamydomonas reinhardtii
Cre16.g669050 5.0kb upstream 5.0kb upstream 10916 true chromosome_16: 4151320-4162235 Chlamydomonas reinhardtii
Cre16.g669050 5.0kb upstream 5.0kb upstream 5000 false chromosome_16: 4157236-4162235 Chlamydomonas reinhardtii
Cre16.g669050 5.0kb downstream 5.0kb downstream 10916 true chromosome_16: 4146320-4157235 Chlamydomonas reinhardtii
Cre16.g669050 5.0kb downstream 5.0kb downstream 5000 false chromosome_16: 4146320-4151319 Chlamydomonas reinhardtii
Cre16.g669050 10.0kb upstream 10.0kb upstream 15916 true chromosome_16: 4151320-4167235 Chlamydomonas reinhardtii
Cre16.g669050 10.0kb upstream 10.0kb upstream 10000 false chromosome_16: 4157236-4167235 Chlamydomonas reinhardtii
Cre16.g669050 10.0kb downstream 10.0kb downstream 15916 true chromosome_16: 4141320-4157235 Chlamydomonas reinhardtii
Cre16.g669050 10.0kb downstream 10.0kb downstream 10000 false chromosome_16: 4141320-4151319 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124077237 5260 Chlorophyte Singleton cluster - no MSA
123395259 5275 Viridiplantae Singleton cluster - no MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.386       Low
cufflinks 0.859        
cufflinks 1.347        
cufflinks 2.142       High
cufflinks 0.639        
cufflinks 0.622        
cufflinks 0.789        
cufflinks 1.621       High
cufflinks 0.384       Low
cufflinks 0.281       Low
cufflinks 3.362       High
cufflinks 0.974        
cufflinks 0.464        
cufflinks 0.474        
cufflinks 1.416        
cufflinks 0.36       Low
cufflinks 0.832        
cufflinks 1.094        
cufflinks 0.305       Low
cufflinks 1.039        
cufflinks 1.556        
cufflinks 1.143        
cufflinks 0.686        
cufflinks 1.576       High
cufflinks 0.92        
cufflinks 0.601323 0.0 1.23159   Low
cufflinks 1.20398 0.0 2.53539   Low
cufflinks 5.61492 0.0 11.4217    
cufflinks 1.6942 0.164882 3.22352    
cufflinks 2.15568 0.190191 4.12117   Low

0 Strain