Gene : Cre16.g653258 C. reinhardtii v5.6
Defline:  (1 of 55) PF00651 - BTB/POZ domain (BTB) Genomic Order:  252
Name:  ? Cre16.g653258 Secondary Identifier:  ? PAC:30777871
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre16.g653258 0.5kb upstream 0.5kb upstream 2472 true chromosome_16: 1522162-1524633 Chlamydomonas reinhardtii
Cre16.g653258 0.5kb upstream 0.5kb upstream 500 false chromosome_16: 1522162-1522661 Chlamydomonas reinhardtii
Cre16.g653258 0.5kb downstream 0.5kb downstream 2472 true chromosome_16: 1522662-1525133 Chlamydomonas reinhardtii
Cre16.g653258 0.5kb downstream 0.5kb downstream 500 false chromosome_16: 1524634-1525133 Chlamydomonas reinhardtii
Cre16.g653258 1.0kb upstream 1.0kb upstream 2972 true chromosome_16: 1521662-1524633 Chlamydomonas reinhardtii
Cre16.g653258 1.0kb upstream 1.0kb upstream 1000 false chromosome_16: 1521662-1522661 Chlamydomonas reinhardtii
Cre16.g653258 1.0kb downstream 1.0kb downstream 2972 true chromosome_16: 1522662-1525633 Chlamydomonas reinhardtii
Cre16.g653258 1.0kb downstream 1.0kb downstream 1000 false chromosome_16: 1524634-1525633 Chlamydomonas reinhardtii
Cre16.g653258 2.0kb upstream 2.0kb upstream 3972 true chromosome_16: 1520662-1524633 Chlamydomonas reinhardtii
Cre16.g653258 2.0kb upstream 2.0kb upstream 2000 false chromosome_16: 1520662-1522661 Chlamydomonas reinhardtii
Cre16.g653258 2.0kb downstream 2.0kb downstream 3972 true chromosome_16: 1522662-1526633 Chlamydomonas reinhardtii
Cre16.g653258 2.0kb downstream 2.0kb downstream 2000 false chromosome_16: 1524634-1526633 Chlamydomonas reinhardtii
Cre16.g653258 5.0kb upstream 5.0kb upstream 6972 true chromosome_16: 1517662-1524633 Chlamydomonas reinhardtii
Cre16.g653258 5.0kb upstream 5.0kb upstream 5000 false chromosome_16: 1517662-1522661 Chlamydomonas reinhardtii
Cre16.g653258 5.0kb downstream 5.0kb downstream 6972 true chromosome_16: 1522662-1529633 Chlamydomonas reinhardtii
Cre16.g653258 5.0kb downstream 5.0kb downstream 5000 false chromosome_16: 1524634-1529633 Chlamydomonas reinhardtii
Cre16.g653258 10.0kb upstream 10.0kb upstream 11972 true chromosome_16: 1512662-1524633 Chlamydomonas reinhardtii
Cre16.g653258 10.0kb upstream 10.0kb upstream 10000 false chromosome_16: 1512662-1522661 Chlamydomonas reinhardtii
Cre16.g653258 10.0kb downstream 10.0kb downstream 11972 true chromosome_16: 1522662-1534633 Chlamydomonas reinhardtii
Cre16.g653258 10.0kb downstream 10.0kb downstream 10000 false chromosome_16: 1524634-1534633 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124094118 5260 Chlorophyte View MSA
123429159 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.008     Low Low
cufflinks 0.136     Low  
cufflinks 0.206       High
cufflinks 0.085     Low  
cufflinks 0.053     Low  
cufflinks 0.206       High
cufflinks 0.32       High
cufflinks 0.268       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.018     Low Low
cufflinks 0.057     Low  
cufflinks 0.105     Low  
cufflinks 0.185        
cufflinks 0.039     Low  
cufflinks 0.08     Low  
cufflinks 0.02     Low Low
cufflinks 0.008     Low Low
cufflinks 0.11     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.03     Low  
cufflinks 0.039     Low  
cufflinks 0.032     Low  
cufflinks 0.265       High
cufflinks 0.083     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0745453 0.0 0.199984 Low Low
cufflinks 1.33107 0.0 2.79098   High
cufflinks 0.540317 0.0 1.5282    
cufflinks 0.23159 0.0 0.533008 Low  
cufflinks 0.982976 0.0 2.14562    

0 Strain