Gene : Cre16.g655400 C. reinhardtii v5.6
Defline:  (1 of 1) K17985 - activating molecule in BECN1-regulated autophagy protein 1 (AMBRA1) Genomic Order:  297
Name:  ? Cre16.g655400 Secondary Identifier:  ? PAC:30777536
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre16.g655400 0.5kb upstream 0.5kb upstream 9396 true chromosome_16: 1814341-1823736 Chlamydomonas reinhardtii
Cre16.g655400 0.5kb upstream 0.5kb upstream 500 false chromosome_16: 1823237-1823736 Chlamydomonas reinhardtii
Cre16.g655400 0.5kb downstream 0.5kb downstream 9396 true chromosome_16: 1813841-1823236 Chlamydomonas reinhardtii
Cre16.g655400 0.5kb downstream 0.5kb downstream 500 false chromosome_16: 1813841-1814340 Chlamydomonas reinhardtii
Cre16.g655400 1.0kb upstream 1.0kb upstream 9896 true chromosome_16: 1814341-1824236 Chlamydomonas reinhardtii
Cre16.g655400 1.0kb upstream 1.0kb upstream 1000 false chromosome_16: 1823237-1824236 Chlamydomonas reinhardtii
Cre16.g655400 1.0kb downstream 1.0kb downstream 9896 true chromosome_16: 1813341-1823236 Chlamydomonas reinhardtii
Cre16.g655400 1.0kb downstream 1.0kb downstream 1000 false chromosome_16: 1813341-1814340 Chlamydomonas reinhardtii
Cre16.g655400 2.0kb upstream 2.0kb upstream 10896 true chromosome_16: 1814341-1825236 Chlamydomonas reinhardtii
Cre16.g655400 2.0kb upstream 2.0kb upstream 2000 false chromosome_16: 1823237-1825236 Chlamydomonas reinhardtii
Cre16.g655400 2.0kb downstream 2.0kb downstream 10896 true chromosome_16: 1812341-1823236 Chlamydomonas reinhardtii
Cre16.g655400 2.0kb downstream 2.0kb downstream 2000 false chromosome_16: 1812341-1814340 Chlamydomonas reinhardtii
Cre16.g655400 5.0kb upstream 5.0kb upstream 13896 true chromosome_16: 1814341-1828236 Chlamydomonas reinhardtii
Cre16.g655400 5.0kb upstream 5.0kb upstream 5000 false chromosome_16: 1823237-1828236 Chlamydomonas reinhardtii
Cre16.g655400 5.0kb downstream 5.0kb downstream 13896 true chromosome_16: 1809341-1823236 Chlamydomonas reinhardtii
Cre16.g655400 5.0kb downstream 5.0kb downstream 5000 false chromosome_16: 1809341-1814340 Chlamydomonas reinhardtii
Cre16.g655400 10.0kb upstream 10.0kb upstream 18896 true chromosome_16: 1814341-1833236 Chlamydomonas reinhardtii
Cre16.g655400 10.0kb upstream 10.0kb upstream 10000 false chromosome_16: 1823237-1833236 Chlamydomonas reinhardtii
Cre16.g655400 10.0kb downstream 10.0kb downstream 18896 true chromosome_16: 1804341-1823236 Chlamydomonas reinhardtii
Cre16.g655400 10.0kb downstream 10.0kb downstream 10000 false chromosome_16: 1804341-1814340 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124097847 5260 Chlorophyte View MSA
123426396 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.651        
cufflinks 1.057        
cufflinks 0.753        
cufflinks 1.103        
cufflinks 0.791        
cufflinks 0.715        
cufflinks 0.884        
cufflinks 1.222        
cufflinks 1.19        
cufflinks 0.222       Low
cufflinks 1.135        
cufflinks 1.303        
cufflinks 0.39       Low
cufflinks 0.838        
cufflinks 0.84        
cufflinks 1.041        
cufflinks 1.999       High
cufflinks 0.86        
cufflinks 0.263       Low
cufflinks 1.519        
cufflinks 1.101        
cufflinks 1.887       High
cufflinks 0.782        
cufflinks 1.412        
cufflinks 1.938       High
cufflinks 1.62868 0.23132 3.02605    
cufflinks 3.32384 0.811741 5.83594    
cufflinks 2.79727 0.0 5.75826    
cufflinks 1.42372 0.182613 2.66482    
cufflinks 1.57076 0.1984 2.94313    

0 Strain