Gene : SECY1 C. reinhardtii v5.6
Primary Identifier:  ? Cre16.g681900 Defline:  (1 of 1) PTHR10906//PTHR10906:SF9 - SECY/SEC61-ALPHA FAMILY MEMBER // PREPROTEIN TRANSLOCASE SUBUNIT SCY1, CHLOROPLASTIC
Genomic Order:  895 Name:  ? Cre16.g681900
Secondary Identifier:  ? PAC:30777143
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre16.g681900 0.5kb upstream 0.5kb upstream 4861 true chromosome_16: 5337538-5342398 Chlamydomonas reinhardtii
Cre16.g681900 0.5kb upstream 0.5kb upstream 500 false chromosome_16: 5341899-5342398 Chlamydomonas reinhardtii
Cre16.g681900 0.5kb downstream 0.5kb downstream 4861 true chromosome_16: 5337038-5341898 Chlamydomonas reinhardtii
Cre16.g681900 0.5kb downstream 0.5kb downstream 500 false chromosome_16: 5337038-5337537 Chlamydomonas reinhardtii
Cre16.g681900 1.0kb upstream 1.0kb upstream 5361 true chromosome_16: 5337538-5342898 Chlamydomonas reinhardtii
Cre16.g681900 1.0kb upstream 1.0kb upstream 1000 false chromosome_16: 5341899-5342898 Chlamydomonas reinhardtii
Cre16.g681900 1.0kb downstream 1.0kb downstream 5361 true chromosome_16: 5336538-5341898 Chlamydomonas reinhardtii
Cre16.g681900 1.0kb downstream 1.0kb downstream 1000 false chromosome_16: 5336538-5337537 Chlamydomonas reinhardtii
Cre16.g681900 2.0kb upstream 2.0kb upstream 6361 true chromosome_16: 5337538-5343898 Chlamydomonas reinhardtii
Cre16.g681900 2.0kb upstream 2.0kb upstream 2000 false chromosome_16: 5341899-5343898 Chlamydomonas reinhardtii
Cre16.g681900 2.0kb downstream 2.0kb downstream 6361 true chromosome_16: 5335538-5341898 Chlamydomonas reinhardtii
Cre16.g681900 2.0kb downstream 2.0kb downstream 2000 false chromosome_16: 5335538-5337537 Chlamydomonas reinhardtii
Cre16.g681900 5.0kb upstream 5.0kb upstream 9361 true chromosome_16: 5337538-5346898 Chlamydomonas reinhardtii
Cre16.g681900 5.0kb upstream 5.0kb upstream 5000 false chromosome_16: 5341899-5346898 Chlamydomonas reinhardtii
Cre16.g681900 5.0kb downstream 5.0kb downstream 9361 true chromosome_16: 5332538-5341898 Chlamydomonas reinhardtii
Cre16.g681900 5.0kb downstream 5.0kb downstream 5000 false chromosome_16: 5332538-5337537 Chlamydomonas reinhardtii
Cre16.g681900 10.0kb upstream 10.0kb upstream 14361 true chromosome_16: 5337538-5351898 Chlamydomonas reinhardtii
Cre16.g681900 10.0kb upstream 10.0kb upstream 10000 false chromosome_16: 5341899-5351898 Chlamydomonas reinhardtii
Cre16.g681900 10.0kb downstream 10.0kb downstream 14361 true chromosome_16: 5327538-5341898 Chlamydomonas reinhardtii
Cre16.g681900 10.0kb downstream 10.0kb downstream 10000 false chromosome_16: 5327538-5337537 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124113067 5260 Chlorophyte View MSA
123425781 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 32.061     High High
cufflinks 21.973     High  
cufflinks 10.065        
cufflinks 12.849        
cufflinks 22.544     High  
cufflinks 20.087     High  
cufflinks 6.021       Low
cufflinks 15.381        
cufflinks 36.074     High High
cufflinks 4.685       Low
cufflinks 12.504        
cufflinks 18.013     High  
cufflinks 7.89        
cufflinks 19.657     High  
cufflinks 14.338     High  
cufflinks 35.674     High High
cufflinks 30.164     High  
cufflinks 14.982     High  
cufflinks 1.799       Low
cufflinks 7.771        
cufflinks 15.819     High  
cufflinks 30.588     High High
cufflinks 6.426       Low
cufflinks 16.706     High  
cufflinks 35.481     High High
cufflinks 35.8282 0.838388 70.818 High Low
cufflinks 65.2415 14.7551 115.728 High High
cufflinks 13.6503 0.0 27.4474    
cufflinks 24.4898 1.57887 47.4007 High Low
cufflinks 38.6046 5.28099 71.9282 High High

0 Strain