Gene : Cre16.g685217 C. reinhardtii v5.6
Defline:  (1 of 1) K14307 - nucleoporin p58/p45 (NUPL1, NUP49) Genomic Order:  593
Name:  ? Cre16.g685217 Secondary Identifier:  ? PAC:30777435
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre16.g685217 0.5kb upstream 0.5kb upstream 4854 true chromosome_16: 3623332-3628185 Chlamydomonas reinhardtii
Cre16.g685217 0.5kb upstream 0.5kb upstream 500 false chromosome_16: 3627686-3628185 Chlamydomonas reinhardtii
Cre16.g685217 0.5kb downstream 0.5kb downstream 4854 true chromosome_16: 3622832-3627685 Chlamydomonas reinhardtii
Cre16.g685217 0.5kb downstream 0.5kb downstream 500 false chromosome_16: 3622832-3623331 Chlamydomonas reinhardtii
Cre16.g685217 1.0kb upstream 1.0kb upstream 5354 true chromosome_16: 3623332-3628685 Chlamydomonas reinhardtii
Cre16.g685217 1.0kb upstream 1.0kb upstream 1000 false chromosome_16: 3627686-3628685 Chlamydomonas reinhardtii
Cre16.g685217 1.0kb downstream 1.0kb downstream 5354 true chromosome_16: 3622332-3627685 Chlamydomonas reinhardtii
Cre16.g685217 1.0kb downstream 1.0kb downstream 1000 false chromosome_16: 3622332-3623331 Chlamydomonas reinhardtii
Cre16.g685217 2.0kb upstream 2.0kb upstream 6354 true chromosome_16: 3623332-3629685 Chlamydomonas reinhardtii
Cre16.g685217 2.0kb upstream 2.0kb upstream 2000 false chromosome_16: 3627686-3629685 Chlamydomonas reinhardtii
Cre16.g685217 2.0kb downstream 2.0kb downstream 6354 true chromosome_16: 3621332-3627685 Chlamydomonas reinhardtii
Cre16.g685217 2.0kb downstream 2.0kb downstream 2000 false chromosome_16: 3621332-3623331 Chlamydomonas reinhardtii
Cre16.g685217 5.0kb upstream 5.0kb upstream 9354 true chromosome_16: 3623332-3632685 Chlamydomonas reinhardtii
Cre16.g685217 5.0kb upstream 5.0kb upstream 5000 false chromosome_16: 3627686-3632685 Chlamydomonas reinhardtii
Cre16.g685217 5.0kb downstream 5.0kb downstream 9354 true chromosome_16: 3618332-3627685 Chlamydomonas reinhardtii
Cre16.g685217 5.0kb downstream 5.0kb downstream 5000 false chromosome_16: 3618332-3623331 Chlamydomonas reinhardtii
Cre16.g685217 10.0kb upstream 10.0kb upstream 14354 true chromosome_16: 3623332-3637685 Chlamydomonas reinhardtii
Cre16.g685217 10.0kb upstream 10.0kb upstream 10000 false chromosome_16: 3627686-3637685 Chlamydomonas reinhardtii
Cre16.g685217 10.0kb downstream 10.0kb downstream 14354 true chromosome_16: 3613332-3627685 Chlamydomonas reinhardtii
Cre16.g685217 10.0kb downstream 10.0kb downstream 10000 false chromosome_16: 3613332-3623331 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124093991 5260 Chlorophyte View MSA
123428093 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.343        
cufflinks 4.51       High
cufflinks 2.692        
cufflinks 2.876        
cufflinks 3.569        
cufflinks 3.087        
cufflinks 4.353       High
cufflinks 4.004       High
cufflinks 2.716        
cufflinks 1.056       Low
cufflinks 1.76        
cufflinks 2.887        
cufflinks 2.247        
cufflinks 2.932        
cufflinks 2.7        
cufflinks 2.308        
cufflinks 1.62       Low
cufflinks 2.763        
cufflinks 1.309       Low
cufflinks 2.378        
cufflinks 2.925        
cufflinks 1.459       Low
cufflinks 2.956        
cufflinks 3.011        
cufflinks 1.441       Low
cufflinks 10.7886 1.71719 19.8599   High
cufflinks 9.39651 2.14574 16.6473    
cufflinks 4.22885 0.0 9.3387    
cufflinks 6.56865 1.08034 12.057   Low
cufflinks 6.93056 1.02747 12.8337    

0 Strain