Gene : Cre16.g685501 C. reinhardtii v5.6
Genomic Order:  1238 Name:  ? Cre16.g685501
Secondary Identifier:  ? PAC:30776813
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre16.g685501 0.5kb upstream 0.5kb upstream 4596 true chromosome_16: 7390289-7394884 Chlamydomonas reinhardtii
Cre16.g685501 0.5kb upstream 0.5kb upstream 500 false chromosome_16: 7394385-7394884 Chlamydomonas reinhardtii
Cre16.g685501 0.5kb downstream 0.5kb downstream 4596 true chromosome_16: 7389789-7394384 Chlamydomonas reinhardtii
Cre16.g685501 0.5kb downstream 0.5kb downstream 500 false chromosome_16: 7389789-7390288 Chlamydomonas reinhardtii
Cre16.g685501 1.0kb upstream 1.0kb upstream 5096 true chromosome_16: 7390289-7395384 Chlamydomonas reinhardtii
Cre16.g685501 1.0kb upstream 1.0kb upstream 1000 false chromosome_16: 7394385-7395384 Chlamydomonas reinhardtii
Cre16.g685501 1.0kb downstream 1.0kb downstream 5096 true chromosome_16: 7389289-7394384 Chlamydomonas reinhardtii
Cre16.g685501 1.0kb downstream 1.0kb downstream 1000 false chromosome_16: 7389289-7390288 Chlamydomonas reinhardtii
Cre16.g685501 2.0kb upstream 2.0kb upstream 6096 true chromosome_16: 7390289-7396384 Chlamydomonas reinhardtii
Cre16.g685501 2.0kb upstream 2.0kb upstream 2000 false chromosome_16: 7394385-7396384 Chlamydomonas reinhardtii
Cre16.g685501 2.0kb downstream 2.0kb downstream 6096 true chromosome_16: 7388289-7394384 Chlamydomonas reinhardtii
Cre16.g685501 2.0kb downstream 2.0kb downstream 2000 false chromosome_16: 7388289-7390288 Chlamydomonas reinhardtii
Cre16.g685501 5.0kb upstream 5.0kb upstream 9096 true chromosome_16: 7390289-7399384 Chlamydomonas reinhardtii
Cre16.g685501 5.0kb upstream 5.0kb upstream 5000 false chromosome_16: 7394385-7399384 Chlamydomonas reinhardtii
Cre16.g685501 5.0kb downstream 5.0kb downstream 9096 true chromosome_16: 7385289-7394384 Chlamydomonas reinhardtii
Cre16.g685501 5.0kb downstream 5.0kb downstream 5000 false chromosome_16: 7385289-7390288 Chlamydomonas reinhardtii
Cre16.g685501 10.0kb upstream 10.0kb upstream 14096 true chromosome_16: 7390289-7404384 Chlamydomonas reinhardtii
Cre16.g685501 10.0kb upstream 10.0kb upstream 10000 false chromosome_16: 7394385-7404384 Chlamydomonas reinhardtii
Cre16.g685501 10.0kb downstream 10.0kb downstream 14096 true chromosome_16: 7380289-7394384 Chlamydomonas reinhardtii
Cre16.g685501 10.0kb downstream 10.0kb downstream 10000 false chromosome_16: 7380289-7390288 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124077028 5260 Chlorophyte Singleton cluster - no MSA
123395066 5275 Viridiplantae Singleton cluster - no MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.097       Low
cufflinks 1.441        
cufflinks 1.854        
cufflinks 1.447        
cufflinks 1.339        
cufflinks 1.438        
cufflinks 3.769       High
cufflinks 2.514        
cufflinks 0.077     Low Low
cufflinks 0.217       Low
cufflinks 1.98        
cufflinks 1.717        
cufflinks 1.338        
cufflinks 1.077        
cufflinks 1.777        
cufflinks 0.112     Low Low
cufflinks 0.106     Low Low
cufflinks 1.062        
cufflinks 1.475        
cufflinks 4.51       High
cufflinks 1.557        
cufflinks 0.17       Low
cufflinks 2.265        
cufflinks 2.9        
cufflinks 0.112       Low
cufflinks 0.463758 0.0 0.982721   High
cufflinks 3.23995 0.575557 5.90435    
cufflinks 2.785 0.0 6.1903    
cufflinks 1.03919 0.0 2.23948   High
cufflinks 0.84294 0.0 2.04846   Low

0 Strain