Gene : Cre16.g670500 C. reinhardtii v5.6
Defline:  (1 of 7) PF02190 - ATP-dependent protease La (LON) substrate-binding domain (LON_substr_bdg) Genomic Order:  649
Name:  ? Cre16.g670500 Secondary Identifier:  ? PAC:30777853
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre16.g670500 0.5kb upstream 0.5kb upstream 4162 true chromosome_16: 3999278-4003439 Chlamydomonas reinhardtii
Cre16.g670500 0.5kb upstream 0.5kb upstream 500 false chromosome_16: 3999278-3999777 Chlamydomonas reinhardtii
Cre16.g670500 0.5kb downstream 0.5kb downstream 4162 true chromosome_16: 3999778-4003939 Chlamydomonas reinhardtii
Cre16.g670500 0.5kb downstream 0.5kb downstream 500 false chromosome_16: 4003440-4003939 Chlamydomonas reinhardtii
Cre16.g670500 1.0kb upstream 1.0kb upstream 4662 true chromosome_16: 3998778-4003439 Chlamydomonas reinhardtii
Cre16.g670500 1.0kb upstream 1.0kb upstream 1000 false chromosome_16: 3998778-3999777 Chlamydomonas reinhardtii
Cre16.g670500 1.0kb downstream 1.0kb downstream 4662 true chromosome_16: 3999778-4004439 Chlamydomonas reinhardtii
Cre16.g670500 1.0kb downstream 1.0kb downstream 1000 false chromosome_16: 4003440-4004439 Chlamydomonas reinhardtii
Cre16.g670500 2.0kb upstream 2.0kb upstream 5662 true chromosome_16: 3997778-4003439 Chlamydomonas reinhardtii
Cre16.g670500 2.0kb upstream 2.0kb upstream 2000 false chromosome_16: 3997778-3999777 Chlamydomonas reinhardtii
Cre16.g670500 2.0kb downstream 2.0kb downstream 5662 true chromosome_16: 3999778-4005439 Chlamydomonas reinhardtii
Cre16.g670500 2.0kb downstream 2.0kb downstream 2000 false chromosome_16: 4003440-4005439 Chlamydomonas reinhardtii
Cre16.g670500 5.0kb upstream 5.0kb upstream 8662 true chromosome_16: 3994778-4003439 Chlamydomonas reinhardtii
Cre16.g670500 5.0kb upstream 5.0kb upstream 5000 false chromosome_16: 3994778-3999777 Chlamydomonas reinhardtii
Cre16.g670500 5.0kb downstream 5.0kb downstream 8662 true chromosome_16: 3999778-4008439 Chlamydomonas reinhardtii
Cre16.g670500 5.0kb downstream 5.0kb downstream 5000 false chromosome_16: 4003440-4008439 Chlamydomonas reinhardtii
Cre16.g670500 10.0kb upstream 10.0kb upstream 13662 true chromosome_16: 3989778-4003439 Chlamydomonas reinhardtii
Cre16.g670500 10.0kb upstream 10.0kb upstream 10000 false chromosome_16: 3989778-3999777 Chlamydomonas reinhardtii
Cre16.g670500 10.0kb downstream 10.0kb downstream 13662 true chromosome_16: 3999778-4013439 Chlamydomonas reinhardtii
Cre16.g670500 10.0kb downstream 10.0kb downstream 10000 false chromosome_16: 4003440-4013439 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124113267 5260 Chlorophyte View MSA
123425227 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.307        
cufflinks 0.946        
cufflinks 0.611       Low
cufflinks 0.748        
cufflinks 0.98        
cufflinks 1.549        
cufflinks 0.673        
cufflinks 1.125        
cufflinks 1.756        
cufflinks 1.044        
cufflinks 0.667        
cufflinks 1.368        
cufflinks 1.394        
cufflinks 2.394       High
cufflinks 0.715        
cufflinks 4.076       High
cufflinks 2.001        
cufflinks 1.011        
cufflinks 0.211       Low
cufflinks 1.63        
cufflinks 0.822        
cufflinks 1.28        
cufflinks 1.781        
cufflinks 1.562        
cufflinks 1.532        
cufflinks 10.1094 1.64777 18.571   Low
cufflinks 1.65417 0.0 3.53354    
cufflinks 0.383753 0.0 1.16693   Low
cufflinks 2.14672 0.0953554 4.19809    
cufflinks 3.82359 0.406516 7.24067    

0 Strain