Gene : Cre16.g670261 C. reinhardtii v5.6
Defline:  (1 of 1) K15305 - vacuole morphology and inheritance protein 14 (VAC14, TAX1BP2) Genomic Order:  551
Name:  ? Cre16.g670261 Secondary Identifier:  ? PAC:30776861
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre16.g670261 0.5kb upstream 0.5kb upstream 9064 true chromosome_16: 3440923-3449986 Chlamydomonas reinhardtii
Cre16.g670261 0.5kb upstream 0.5kb upstream 500 false chromosome_16: 3449487-3449986 Chlamydomonas reinhardtii
Cre16.g670261 0.5kb downstream 0.5kb downstream 9064 true chromosome_16: 3440423-3449486 Chlamydomonas reinhardtii
Cre16.g670261 0.5kb downstream 0.5kb downstream 500 false chromosome_16: 3440423-3440922 Chlamydomonas reinhardtii
Cre16.g670261 1.0kb upstream 1.0kb upstream 9564 true chromosome_16: 3440923-3450486 Chlamydomonas reinhardtii
Cre16.g670261 1.0kb upstream 1.0kb upstream 1000 false chromosome_16: 3449487-3450486 Chlamydomonas reinhardtii
Cre16.g670261 1.0kb downstream 1.0kb downstream 9564 true chromosome_16: 3439923-3449486 Chlamydomonas reinhardtii
Cre16.g670261 1.0kb downstream 1.0kb downstream 1000 false chromosome_16: 3439923-3440922 Chlamydomonas reinhardtii
Cre16.g670261 2.0kb upstream 2.0kb upstream 10564 true chromosome_16: 3440923-3451486 Chlamydomonas reinhardtii
Cre16.g670261 2.0kb upstream 2.0kb upstream 2000 false chromosome_16: 3449487-3451486 Chlamydomonas reinhardtii
Cre16.g670261 2.0kb downstream 2.0kb downstream 10564 true chromosome_16: 3438923-3449486 Chlamydomonas reinhardtii
Cre16.g670261 2.0kb downstream 2.0kb downstream 2000 false chromosome_16: 3438923-3440922 Chlamydomonas reinhardtii
Cre16.g670261 5.0kb upstream 5.0kb upstream 13564 true chromosome_16: 3440923-3454486 Chlamydomonas reinhardtii
Cre16.g670261 5.0kb upstream 5.0kb upstream 5000 false chromosome_16: 3449487-3454486 Chlamydomonas reinhardtii
Cre16.g670261 5.0kb downstream 5.0kb downstream 13564 true chromosome_16: 3435923-3449486 Chlamydomonas reinhardtii
Cre16.g670261 5.0kb downstream 5.0kb downstream 5000 false chromosome_16: 3435923-3440922 Chlamydomonas reinhardtii
Cre16.g670261 10.0kb upstream 10.0kb upstream 18564 true chromosome_16: 3440923-3459486 Chlamydomonas reinhardtii
Cre16.g670261 10.0kb upstream 10.0kb upstream 10000 false chromosome_16: 3449487-3459486 Chlamydomonas reinhardtii
Cre16.g670261 10.0kb downstream 10.0kb downstream 18564 true chromosome_16: 3430923-3449486 Chlamydomonas reinhardtii
Cre16.g670261 10.0kb downstream 10.0kb downstream 10000 false chromosome_16: 3430923-3440922 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124109228 5260 Chlorophyte View MSA
123428205 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.619       Low
cufflinks 2.824       High
cufflinks 2.725        
cufflinks 2.182        
cufflinks 2.174        
cufflinks 2.272        
cufflinks 3.357       High
cufflinks 2.629        
cufflinks 1.02       Low
cufflinks 1.025       Low
cufflinks 2.034        
cufflinks 2.338        
cufflinks 1.536        
cufflinks 2.357        
cufflinks 1.875        
cufflinks 0.957       Low
cufflinks 1.377        
cufflinks 2.296        
cufflinks 0.516       Low
cufflinks 1.675        
cufflinks 2.006        
cufflinks 1.296        
cufflinks 2.473        
cufflinks 2.11        
cufflinks 1.475        
cufflinks 2.63166 0.43114 4.83217   Low
cufflinks 4.2114 1.01223 7.41057    
cufflinks 5.93513 0.0 11.9493    
cufflinks 4.04977 0.659908 7.43963    
cufflinks 8.00492 1.55881 14.451   High

0 Strain