Gene : OAD1 C. reinhardtii v5.6
Primary Identifier:  ? Cre16.g675900 Defline:  (1 of 1) PTHR11482//PTHR11482:SF45 - ARGININE/DIAMINOPIMELATE/ORNITHINE DECARBOXYLASE // GROUP IV DECARBOXYLASE
Genomic Order:  1020 Name:  ? Cre16.g675900
Secondary Identifier:  ? PAC:30777480
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Creinhardtii PWY-5097 Chlamydomonas reinhardtii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre16.g675900 0.5kb upstream 0.5kb upstream 4486 true chromosome_16: 6094350-6098835 Chlamydomonas reinhardtii
Cre16.g675900 0.5kb upstream 0.5kb upstream 500 false chromosome_16: 6098336-6098835 Chlamydomonas reinhardtii
Cre16.g675900 0.5kb downstream 0.5kb downstream 4486 true chromosome_16: 6093850-6098335 Chlamydomonas reinhardtii
Cre16.g675900 0.5kb downstream 0.5kb downstream 500 false chromosome_16: 6093850-6094349 Chlamydomonas reinhardtii
Cre16.g675900 1.0kb upstream 1.0kb upstream 4986 true chromosome_16: 6094350-6099335 Chlamydomonas reinhardtii
Cre16.g675900 1.0kb upstream 1.0kb upstream 1000 false chromosome_16: 6098336-6099335 Chlamydomonas reinhardtii
Cre16.g675900 1.0kb downstream 1.0kb downstream 4986 true chromosome_16: 6093350-6098335 Chlamydomonas reinhardtii
Cre16.g675900 1.0kb downstream 1.0kb downstream 1000 false chromosome_16: 6093350-6094349 Chlamydomonas reinhardtii
Cre16.g675900 2.0kb upstream 2.0kb upstream 5986 true chromosome_16: 6094350-6100335 Chlamydomonas reinhardtii
Cre16.g675900 2.0kb upstream 2.0kb upstream 2000 false chromosome_16: 6098336-6100335 Chlamydomonas reinhardtii
Cre16.g675900 2.0kb downstream 2.0kb downstream 5986 true chromosome_16: 6092350-6098335 Chlamydomonas reinhardtii
Cre16.g675900 2.0kb downstream 2.0kb downstream 2000 false chromosome_16: 6092350-6094349 Chlamydomonas reinhardtii
Cre16.g675900 5.0kb upstream 5.0kb upstream 8986 true chromosome_16: 6094350-6103335 Chlamydomonas reinhardtii
Cre16.g675900 5.0kb upstream 5.0kb upstream 5000 false chromosome_16: 6098336-6103335 Chlamydomonas reinhardtii
Cre16.g675900 5.0kb downstream 5.0kb downstream 8986 true chromosome_16: 6089350-6098335 Chlamydomonas reinhardtii
Cre16.g675900 5.0kb downstream 5.0kb downstream 5000 false chromosome_16: 6089350-6094349 Chlamydomonas reinhardtii
Cre16.g675900 10.0kb upstream 10.0kb upstream 13986 true chromosome_16: 6094350-6108335 Chlamydomonas reinhardtii
Cre16.g675900 10.0kb upstream 10.0kb upstream 10000 false chromosome_16: 6098336-6108335 Chlamydomonas reinhardtii
Cre16.g675900 10.0kb downstream 10.0kb downstream 13986 true chromosome_16: 6084350-6098335 Chlamydomonas reinhardtii
Cre16.g675900 10.0kb downstream 10.0kb downstream 10000 false chromosome_16: 6084350-6094349 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124094476 5260 Chlorophyte View MSA
123411305 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.507        
cufflinks 0.191       Low
cufflinks 0.29        
cufflinks 0.413        
cufflinks 0.315        
cufflinks 0.439        
cufflinks 0.582       High
cufflinks 0.503        
cufflinks 0.287        
cufflinks 0.094       Low
cufflinks 0.322        
cufflinks 0.466        
cufflinks 0.22        
cufflinks 0.442        
cufflinks 0.419        
cufflinks 0.307        
cufflinks 0.145       Low
cufflinks 0.348        
cufflinks 0.11       Low
cufflinks 0.564       High
cufflinks 0.509        
cufflinks 0.237        
cufflinks 0.42        
cufflinks 0.361        
cufflinks 0.291        
cufflinks 0.0965227 0.0 0.235081 Low Low
cufflinks 1.23335 0.0 2.54752    
cufflinks 0.441962 0.0 1.23043    
cufflinks 0.507619 0.0 1.06462    
cufflinks 0.665746 0.0 1.42228    

0 Strain