Gene : Cre17.g705550 C. reinhardtii v5.6
Defline:  (1 of 1) K13174 - THO complex subunit 5 (THOC5) Genomic Order:  212
Name:  ? Cre17.g705550 Secondary Identifier:  ? PAC:30782312
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre17.g705550 0.5kb upstream 0.5kb upstream 4429 true chromosome_17: 1279219-1283647 Chlamydomonas reinhardtii
Cre17.g705550 0.5kb upstream 0.5kb upstream 500 false chromosome_17: 1279219-1279718 Chlamydomonas reinhardtii
Cre17.g705550 0.5kb downstream 0.5kb downstream 4429 true chromosome_17: 1279719-1284147 Chlamydomonas reinhardtii
Cre17.g705550 0.5kb downstream 0.5kb downstream 500 false chromosome_17: 1283648-1284147 Chlamydomonas reinhardtii
Cre17.g705550 1.0kb upstream 1.0kb upstream 4929 true chromosome_17: 1278719-1283647 Chlamydomonas reinhardtii
Cre17.g705550 1.0kb upstream 1.0kb upstream 1000 false chromosome_17: 1278719-1279718 Chlamydomonas reinhardtii
Cre17.g705550 1.0kb downstream 1.0kb downstream 4929 true chromosome_17: 1279719-1284647 Chlamydomonas reinhardtii
Cre17.g705550 1.0kb downstream 1.0kb downstream 1000 false chromosome_17: 1283648-1284647 Chlamydomonas reinhardtii
Cre17.g705550 2.0kb upstream 2.0kb upstream 5929 true chromosome_17: 1277719-1283647 Chlamydomonas reinhardtii
Cre17.g705550 2.0kb upstream 2.0kb upstream 2000 false chromosome_17: 1277719-1279718 Chlamydomonas reinhardtii
Cre17.g705550 2.0kb downstream 2.0kb downstream 5929 true chromosome_17: 1279719-1285647 Chlamydomonas reinhardtii
Cre17.g705550 2.0kb downstream 2.0kb downstream 2000 false chromosome_17: 1283648-1285647 Chlamydomonas reinhardtii
Cre17.g705550 5.0kb upstream 5.0kb upstream 8929 true chromosome_17: 1274719-1283647 Chlamydomonas reinhardtii
Cre17.g705550 5.0kb upstream 5.0kb upstream 5000 false chromosome_17: 1274719-1279718 Chlamydomonas reinhardtii
Cre17.g705550 5.0kb downstream 5.0kb downstream 8929 true chromosome_17: 1279719-1288647 Chlamydomonas reinhardtii
Cre17.g705550 5.0kb downstream 5.0kb downstream 5000 false chromosome_17: 1283648-1288647 Chlamydomonas reinhardtii
Cre17.g705550 10.0kb upstream 10.0kb upstream 13929 true chromosome_17: 1269719-1283647 Chlamydomonas reinhardtii
Cre17.g705550 10.0kb upstream 10.0kb upstream 10000 false chromosome_17: 1269719-1279718 Chlamydomonas reinhardtii
Cre17.g705550 10.0kb downstream 10.0kb downstream 13929 true chromosome_17: 1279719-1293647 Chlamydomonas reinhardtii
Cre17.g705550 10.0kb downstream 10.0kb downstream 10000 false chromosome_17: 1283648-1293647 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124113109 5260 Chlorophyte View MSA
123425483 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.453        
cufflinks 6.336       High
cufflinks 3.823        
cufflinks 3.394        
cufflinks 4.458        
cufflinks 4.312        
cufflinks 5.449       High
cufflinks 5.245       High
cufflinks 3.953        
cufflinks 1.316       Low
cufflinks 2.307        
cufflinks 3.813        
cufflinks 2.241        
cufflinks 4.589        
cufflinks 2.855        
cufflinks 3.142        
cufflinks 1.524       Low
cufflinks 3.315        
cufflinks 1.605       Low
cufflinks 3.612        
cufflinks 3.609        
cufflinks 1.707       Low
cufflinks 3.673        
cufflinks 4.09        
cufflinks 1.789       Low
cufflinks 7.74781 1.07143 14.4242   High
cufflinks 7.97992 2.03191 13.9279    
cufflinks 6.25972 0.0 12.7245    
cufflinks 6.25408 0.985195 11.523   Low
cufflinks 8.24229 1.64809 14.8365   High

0 Strain