Gene : Cre17.g705200 C. reinhardtii v5.6
Defline:  (1 of 48) PF05548 - Gametolysin peptidase M11 (Peptidase_M11) Genomic Order:  204
Name:  ? Cre17.g705200 Secondary Identifier:  ? PAC:30782667
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre17.g705200 0.5kb upstream 0.5kb upstream 8507 true chromosome_17: 1234459-1242965 Chlamydomonas reinhardtii
Cre17.g705200 0.5kb upstream 0.5kb upstream 500 false chromosome_17: 1234459-1234958 Chlamydomonas reinhardtii
Cre17.g705200 0.5kb downstream 0.5kb downstream 8507 true chromosome_17: 1234959-1243465 Chlamydomonas reinhardtii
Cre17.g705200 0.5kb downstream 0.5kb downstream 500 false chromosome_17: 1242966-1243465 Chlamydomonas reinhardtii
Cre17.g705200 1.0kb upstream 1.0kb upstream 9007 true chromosome_17: 1233959-1242965 Chlamydomonas reinhardtii
Cre17.g705200 1.0kb upstream 1.0kb upstream 1000 false chromosome_17: 1233959-1234958 Chlamydomonas reinhardtii
Cre17.g705200 1.0kb downstream 1.0kb downstream 9007 true chromosome_17: 1234959-1243965 Chlamydomonas reinhardtii
Cre17.g705200 1.0kb downstream 1.0kb downstream 1000 false chromosome_17: 1242966-1243965 Chlamydomonas reinhardtii
Cre17.g705200 2.0kb upstream 2.0kb upstream 10007 true chromosome_17: 1232959-1242965 Chlamydomonas reinhardtii
Cre17.g705200 2.0kb upstream 2.0kb upstream 2000 false chromosome_17: 1232959-1234958 Chlamydomonas reinhardtii
Cre17.g705200 2.0kb downstream 2.0kb downstream 10007 true chromosome_17: 1234959-1244965 Chlamydomonas reinhardtii
Cre17.g705200 2.0kb downstream 2.0kb downstream 2000 false chromosome_17: 1242966-1244965 Chlamydomonas reinhardtii
Cre17.g705200 5.0kb upstream 5.0kb upstream 13007 true chromosome_17: 1229959-1242965 Chlamydomonas reinhardtii
Cre17.g705200 5.0kb upstream 5.0kb upstream 5000 false chromosome_17: 1229959-1234958 Chlamydomonas reinhardtii
Cre17.g705200 5.0kb downstream 5.0kb downstream 13007 true chromosome_17: 1234959-1247965 Chlamydomonas reinhardtii
Cre17.g705200 5.0kb downstream 5.0kb downstream 5000 false chromosome_17: 1242966-1247965 Chlamydomonas reinhardtii
Cre17.g705200 10.0kb upstream 10.0kb upstream 18007 true chromosome_17: 1224959-1242965 Chlamydomonas reinhardtii
Cre17.g705200 10.0kb upstream 10.0kb upstream 10000 false chromosome_17: 1224959-1234958 Chlamydomonas reinhardtii
Cre17.g705200 10.0kb downstream 10.0kb downstream 18007 true chromosome_17: 1234959-1252965 Chlamydomonas reinhardtii
Cre17.g705200 10.0kb downstream 10.0kb downstream 10000 false chromosome_17: 1242966-1252965 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124078832 5260 Chlorophyte Singleton cluster - no MSA
123396732 5275 Viridiplantae Singleton cluster - no MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.897        
cufflinks 3.368        
cufflinks 2.086        
cufflinks 3.278        
cufflinks 3.988        
cufflinks 2.924        
cufflinks 5.81       High
cufflinks 3.545        
cufflinks 3.472        
cufflinks 1.231       Low
cufflinks 4.608        
cufflinks 7.162       High
cufflinks 1.455       Low
cufflinks 4.6        
cufflinks 3.324        
cufflinks 3.952        
cufflinks 1.994        
cufflinks 2.048        
cufflinks 1.241       Low
cufflinks 6.218       High
cufflinks 4.116        
cufflinks 1.578       Low
cufflinks 3.648        
cufflinks 3.544        
cufflinks 2.701        
cufflinks 4.91149 0.582531 9.24045   High
cufflinks 9.59646 2.55877 16.6341    
cufflinks 9.87307 0.0 19.9394    
cufflinks 10.2431 0.465486 20.0207   High
cufflinks 18.0204 2.01874 34.0221    

0 Strain