Gene : HRF1 C. reinhardtii v5.6
Primary Identifier:  ? Cre17.g704550 Defline:  (1 of 1) PTHR14083:SF0 - PROTEIN YIF-1, ISOFORM B
Genomic Order:  191 Name:  ? Cre17.g704550
Secondary Identifier:  ? PAC:30781857
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre17.g704550 0.5kb upstream 0.5kb upstream 4019 true chromosome_17: 1167777-1171795 Chlamydomonas reinhardtii
Cre17.g704550 0.5kb upstream 0.5kb upstream 500 false chromosome_17: 1171296-1171795 Chlamydomonas reinhardtii
Cre17.g704550 0.5kb downstream 0.5kb downstream 4019 true chromosome_17: 1167277-1171295 Chlamydomonas reinhardtii
Cre17.g704550 0.5kb downstream 0.5kb downstream 500 false chromosome_17: 1167277-1167776 Chlamydomonas reinhardtii
Cre17.g704550 1.0kb upstream 1.0kb upstream 4519 true chromosome_17: 1167777-1172295 Chlamydomonas reinhardtii
Cre17.g704550 1.0kb upstream 1.0kb upstream 1000 false chromosome_17: 1171296-1172295 Chlamydomonas reinhardtii
Cre17.g704550 1.0kb downstream 1.0kb downstream 4519 true chromosome_17: 1166777-1171295 Chlamydomonas reinhardtii
Cre17.g704550 1.0kb downstream 1.0kb downstream 1000 false chromosome_17: 1166777-1167776 Chlamydomonas reinhardtii
Cre17.g704550 2.0kb upstream 2.0kb upstream 5519 true chromosome_17: 1167777-1173295 Chlamydomonas reinhardtii
Cre17.g704550 2.0kb upstream 2.0kb upstream 2000 false chromosome_17: 1171296-1173295 Chlamydomonas reinhardtii
Cre17.g704550 2.0kb downstream 2.0kb downstream 5519 true chromosome_17: 1165777-1171295 Chlamydomonas reinhardtii
Cre17.g704550 2.0kb downstream 2.0kb downstream 2000 false chromosome_17: 1165777-1167776 Chlamydomonas reinhardtii
Cre17.g704550 5.0kb upstream 5.0kb upstream 8519 true chromosome_17: 1167777-1176295 Chlamydomonas reinhardtii
Cre17.g704550 5.0kb upstream 5.0kb upstream 5000 false chromosome_17: 1171296-1176295 Chlamydomonas reinhardtii
Cre17.g704550 5.0kb downstream 5.0kb downstream 8519 true chromosome_17: 1162777-1171295 Chlamydomonas reinhardtii
Cre17.g704550 5.0kb downstream 5.0kb downstream 5000 false chromosome_17: 1162777-1167776 Chlamydomonas reinhardtii
Cre17.g704550 10.0kb upstream 10.0kb upstream 13519 true chromosome_17: 1167777-1181295 Chlamydomonas reinhardtii
Cre17.g704550 10.0kb upstream 10.0kb upstream 10000 false chromosome_17: 1171296-1181295 Chlamydomonas reinhardtii
Cre17.g704550 10.0kb downstream 10.0kb downstream 13519 true chromosome_17: 1157777-1171295 Chlamydomonas reinhardtii
Cre17.g704550 10.0kb downstream 10.0kb downstream 10000 false chromosome_17: 1157777-1167776 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124110985 5260 Chlorophyte View MSA
123427563 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.121        
cufflinks 2.884       High
cufflinks 2.027        
cufflinks 2.126        
cufflinks 2.21        
cufflinks 2.081        
cufflinks 2.979       High
cufflinks 2.789       High
cufflinks 1.131        
cufflinks 0.858       Low
cufflinks 1.138        
cufflinks 1.917        
cufflinks 1.536        
cufflinks 2.315        
cufflinks 1.673        
cufflinks 1.257        
cufflinks 1.292        
cufflinks 1.897        
cufflinks 0.673       Low
cufflinks 1.556        
cufflinks 1.43        
cufflinks 1.107        
cufflinks 2.629       High
cufflinks 1.858        
cufflinks 0.951       Low
cufflinks 5.3687 0.688269 10.0491    
cufflinks 6.76887 0.656521 12.8812    
cufflinks 11.5438 0.0 23.6829    
cufflinks 6.52288 0.963317 12.0825    
cufflinks 7.3452 1.04672 13.6437    

0 Strain