Gene : XPD1 C. reinhardtii v5.6
Primary Identifier:  ? Cre17.g706300 Defline:  (1 of 1) K10844 - DNA excision repair protein ERCC-2 (ERCC2, XPD)
Genomic Order:  229 Name:  ? Cre17.g706300
Secondary Identifier:  ? PAC:30781648
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre17.g706300 0.5kb upstream 0.5kb upstream 10172 true chromosome_17: 1380701-1390872 Chlamydomonas reinhardtii
Cre17.g706300 0.5kb upstream 0.5kb upstream 500 false chromosome_17: 1380701-1381200 Chlamydomonas reinhardtii
Cre17.g706300 0.5kb downstream 0.5kb downstream 10172 true chromosome_17: 1381201-1391372 Chlamydomonas reinhardtii
Cre17.g706300 0.5kb downstream 0.5kb downstream 500 false chromosome_17: 1390873-1391372 Chlamydomonas reinhardtii
Cre17.g706300 1.0kb upstream 1.0kb upstream 10672 true chromosome_17: 1380201-1390872 Chlamydomonas reinhardtii
Cre17.g706300 1.0kb upstream 1.0kb upstream 1000 false chromosome_17: 1380201-1381200 Chlamydomonas reinhardtii
Cre17.g706300 1.0kb downstream 1.0kb downstream 10672 true chromosome_17: 1381201-1391872 Chlamydomonas reinhardtii
Cre17.g706300 1.0kb downstream 1.0kb downstream 1000 false chromosome_17: 1390873-1391872 Chlamydomonas reinhardtii
Cre17.g706300 2.0kb upstream 2.0kb upstream 11672 true chromosome_17: 1379201-1390872 Chlamydomonas reinhardtii
Cre17.g706300 2.0kb upstream 2.0kb upstream 2000 false chromosome_17: 1379201-1381200 Chlamydomonas reinhardtii
Cre17.g706300 2.0kb downstream 2.0kb downstream 11672 true chromosome_17: 1381201-1392872 Chlamydomonas reinhardtii
Cre17.g706300 2.0kb downstream 2.0kb downstream 2000 false chromosome_17: 1390873-1392872 Chlamydomonas reinhardtii
Cre17.g706300 5.0kb upstream 5.0kb upstream 14672 true chromosome_17: 1376201-1390872 Chlamydomonas reinhardtii
Cre17.g706300 5.0kb upstream 5.0kb upstream 5000 false chromosome_17: 1376201-1381200 Chlamydomonas reinhardtii
Cre17.g706300 5.0kb downstream 5.0kb downstream 14672 true chromosome_17: 1381201-1395872 Chlamydomonas reinhardtii
Cre17.g706300 5.0kb downstream 5.0kb downstream 5000 false chromosome_17: 1390873-1395872 Chlamydomonas reinhardtii
Cre17.g706300 10.0kb upstream 10.0kb upstream 19672 true chromosome_17: 1371201-1390872 Chlamydomonas reinhardtii
Cre17.g706300 10.0kb upstream 10.0kb upstream 10000 false chromosome_17: 1371201-1381200 Chlamydomonas reinhardtii
Cre17.g706300 10.0kb downstream 10.0kb downstream 19672 true chromosome_17: 1381201-1400872 Chlamydomonas reinhardtii
Cre17.g706300 10.0kb downstream 10.0kb downstream 10000 false chromosome_17: 1390873-1400872 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124110022 5260 Chlorophyte View MSA
123426727 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.468        
cufflinks 2.097        
cufflinks 2.039        
cufflinks 2.114        
cufflinks 1.72        
cufflinks 1.959        
cufflinks 1.815        
cufflinks 2.366        
cufflinks 1.607        
cufflinks 0.826       Low
cufflinks 2.168        
cufflinks 2.049        
cufflinks 1.318        
cufflinks 1.781        
cufflinks 1.58        
cufflinks 2.048        
cufflinks 1.948        
cufflinks 1.877        
cufflinks 0.61       Low
cufflinks 2.684       High
cufflinks 1.847        
cufflinks 2.115        
cufflinks 1.274        
cufflinks 2.394        
cufflinks 2.367        
cufflinks 1.16256 0.0807232 2.24439   Low
cufflinks 5.51807 1.41404 9.62211    
cufflinks 4.33966 0.0 8.85135    
cufflinks 2.34606 0.353862 4.33827    
cufflinks 3.82624 0.71617 6.9363   Low

0 Strain