Gene : HEP2 C. reinhardtii v5.6
Primary Identifier:  ? Cre17.g707950 Defline:  (1 of 1) PTHR20922//PTHR20922:SF15 - UNCHARACTERIZED // A_TM021B04.14 PROTEIN
Genomic Order:  262 Name:  ? Cre17.g707950
Secondary Identifier:  ? PAC:30782023
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre17.g707950 0.5kb upstream 0.5kb upstream 4354 true chromosome_17: 1613715-1618068 Chlamydomonas reinhardtii
Cre17.g707950 0.5kb upstream 0.5kb upstream 500 false chromosome_17: 1613715-1614214 Chlamydomonas reinhardtii
Cre17.g707950 0.5kb downstream 0.5kb downstream 4354 true chromosome_17: 1614215-1618568 Chlamydomonas reinhardtii
Cre17.g707950 0.5kb downstream 0.5kb downstream 500 false chromosome_17: 1618069-1618568 Chlamydomonas reinhardtii
Cre17.g707950 1.0kb upstream 1.0kb upstream 4854 true chromosome_17: 1613215-1618068 Chlamydomonas reinhardtii
Cre17.g707950 1.0kb upstream 1.0kb upstream 1000 false chromosome_17: 1613215-1614214 Chlamydomonas reinhardtii
Cre17.g707950 1.0kb downstream 1.0kb downstream 4854 true chromosome_17: 1614215-1619068 Chlamydomonas reinhardtii
Cre17.g707950 1.0kb downstream 1.0kb downstream 1000 false chromosome_17: 1618069-1619068 Chlamydomonas reinhardtii
Cre17.g707950 2.0kb upstream 2.0kb upstream 5854 true chromosome_17: 1612215-1618068 Chlamydomonas reinhardtii
Cre17.g707950 2.0kb upstream 2.0kb upstream 2000 false chromosome_17: 1612215-1614214 Chlamydomonas reinhardtii
Cre17.g707950 2.0kb downstream 2.0kb downstream 5854 true chromosome_17: 1614215-1620068 Chlamydomonas reinhardtii
Cre17.g707950 2.0kb downstream 2.0kb downstream 2000 false chromosome_17: 1618069-1620068 Chlamydomonas reinhardtii
Cre17.g707950 5.0kb upstream 5.0kb upstream 8854 true chromosome_17: 1609215-1618068 Chlamydomonas reinhardtii
Cre17.g707950 5.0kb upstream 5.0kb upstream 5000 false chromosome_17: 1609215-1614214 Chlamydomonas reinhardtii
Cre17.g707950 5.0kb downstream 5.0kb downstream 8854 true chromosome_17: 1614215-1623068 Chlamydomonas reinhardtii
Cre17.g707950 5.0kb downstream 5.0kb downstream 5000 false chromosome_17: 1618069-1623068 Chlamydomonas reinhardtii
Cre17.g707950 10.0kb upstream 10.0kb upstream 13854 true chromosome_17: 1604215-1618068 Chlamydomonas reinhardtii
Cre17.g707950 10.0kb upstream 10.0kb upstream 10000 false chromosome_17: 1604215-1614214 Chlamydomonas reinhardtii
Cre17.g707950 10.0kb downstream 10.0kb downstream 13854 true chromosome_17: 1614215-1628068 Chlamydomonas reinhardtii
Cre17.g707950 10.0kb downstream 10.0kb downstream 10000 false chromosome_17: 1618069-1628068 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124112546 5260 Chlorophyte View MSA
123425918 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.461       Low
cufflinks 5.352        
cufflinks 5.192        
cufflinks 5.932        
cufflinks 4.795        
cufflinks 5.197        
cufflinks 5.006        
cufflinks 6.174       High
cufflinks 4.599        
cufflinks 3.841        
cufflinks 5.313        
cufflinks 4.919        
cufflinks 6.087       High
cufflinks 5.216        
cufflinks 3.944        
cufflinks 5.258        
cufflinks 2.788       Low
cufflinks 4.722        
cufflinks 2.902       Low
cufflinks 7.479       High
cufflinks 4.038        
cufflinks 3.925        
cufflinks 4.929        
cufflinks 6.248       High
cufflinks 3.037       Low
cufflinks 2.79207 0.30276 5.28139   Low
cufflinks 16.0348 4.37353 27.6961    
cufflinks 12.0319 0.0 24.178   High
cufflinks 5.47391 0.927744 10.0201    
cufflinks 10.6199 2.13224 19.1075   High

0 Strain