Gene : Cre17.g706850 C. reinhardtii v5.6
Defline:  (1 of 1) PTHR13377 - PLACENTAL PROTEIN 6 Genomic Order:  239
Name:  ? Cre17.g706850 Secondary Identifier:  ? PAC:30782315
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

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Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre17.g706850 0.5kb upstream 0.5kb upstream 2949 true chromosome_17: 1462547-1465495 Chlamydomonas reinhardtii
Cre17.g706850 0.5kb upstream 0.5kb upstream 500 false chromosome_17: 1462547-1463046 Chlamydomonas reinhardtii
Cre17.g706850 0.5kb downstream 0.5kb downstream 2949 true chromosome_17: 1463047-1465995 Chlamydomonas reinhardtii
Cre17.g706850 0.5kb downstream 0.5kb downstream 500 false chromosome_17: 1465496-1465995 Chlamydomonas reinhardtii
Cre17.g706850 1.0kb upstream 1.0kb upstream 3449 true chromosome_17: 1462047-1465495 Chlamydomonas reinhardtii
Cre17.g706850 1.0kb upstream 1.0kb upstream 1000 false chromosome_17: 1462047-1463046 Chlamydomonas reinhardtii
Cre17.g706850 1.0kb downstream 1.0kb downstream 3449 true chromosome_17: 1463047-1466495 Chlamydomonas reinhardtii
Cre17.g706850 1.0kb downstream 1.0kb downstream 1000 false chromosome_17: 1465496-1466495 Chlamydomonas reinhardtii
Cre17.g706850 2.0kb upstream 2.0kb upstream 4449 true chromosome_17: 1461047-1465495 Chlamydomonas reinhardtii
Cre17.g706850 2.0kb upstream 2.0kb upstream 2000 false chromosome_17: 1461047-1463046 Chlamydomonas reinhardtii
Cre17.g706850 2.0kb downstream 2.0kb downstream 4449 true chromosome_17: 1463047-1467495 Chlamydomonas reinhardtii
Cre17.g706850 2.0kb downstream 2.0kb downstream 2000 false chromosome_17: 1465496-1467495 Chlamydomonas reinhardtii
Cre17.g706850 5.0kb upstream 5.0kb upstream 7449 true chromosome_17: 1458047-1465495 Chlamydomonas reinhardtii
Cre17.g706850 5.0kb upstream 5.0kb upstream 5000 false chromosome_17: 1458047-1463046 Chlamydomonas reinhardtii
Cre17.g706850 5.0kb downstream 5.0kb downstream 7449 true chromosome_17: 1463047-1470495 Chlamydomonas reinhardtii
Cre17.g706850 5.0kb downstream 5.0kb downstream 5000 false chromosome_17: 1465496-1470495 Chlamydomonas reinhardtii
Cre17.g706850 10.0kb upstream 10.0kb upstream 12449 true chromosome_17: 1453047-1465495 Chlamydomonas reinhardtii
Cre17.g706850 10.0kb upstream 10.0kb upstream 10000 false chromosome_17: 1453047-1463046 Chlamydomonas reinhardtii
Cre17.g706850 10.0kb downstream 10.0kb downstream 12449 true chromosome_17: 1463047-1475495 Chlamydomonas reinhardtii
Cre17.g706850 10.0kb downstream 10.0kb downstream 10000 false chromosome_17: 1465496-1475495 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124110790 5260 Chlorophyte View MSA
123424498 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.053     High  
cufflinks 20.554     High High
cufflinks 17.206     High  
cufflinks 15.771     High  
cufflinks 16.546     High  
cufflinks 17.464     High  
cufflinks 24.405     High High
cufflinks 22.408     High High
cufflinks 12.995     High  
cufflinks 7.584     High Low
cufflinks 7.087       Low
cufflinks 16.295     High  
cufflinks 19.017     High  
cufflinks 18.38     High  
cufflinks 10.977        
cufflinks 10.809        
cufflinks 10.965        
cufflinks 13.187        
cufflinks 4.889       Low
cufflinks 14.784     High  
cufflinks 10.808        
cufflinks 9.912        
cufflinks 23.485     High High
cufflinks 15.331     High  
cufflinks 10.518        
cufflinks 13.4759 2.06422 24.8877   Low
cufflinks 17.6532 4.63799 30.6683    
cufflinks 26.5925 0.0 53.4823 High High
cufflinks 14.6089 2.12203 27.0957    
cufflinks 29.6045 5.55712 53.6519 High High

0 Strain