Gene : Cre16.g690750 C. reinhardtii v5.6
Defline:  (1 of 18) PTHR10774 - EXTENDED SYNAPTOTAGMIN-RELATED Genomic Order:  127
Name:  ? Cre16.g690750 Secondary Identifier:  ? PAC:30777703
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Creinhardtii PWY-7511 Chlamydomonas reinhardtii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre16.g690750 0.5kb upstream 0.5kb upstream 7062 true chromosome_16: 773434-780495 Chlamydomonas reinhardtii
Cre16.g690750 0.5kb upstream 0.5kb upstream 500 false chromosome_16: 773434-773933 Chlamydomonas reinhardtii
Cre16.g690750 0.5kb downstream 0.5kb downstream 7062 true chromosome_16: 773934-780995 Chlamydomonas reinhardtii
Cre16.g690750 0.5kb downstream 0.5kb downstream 500 false chromosome_16: 780496-780995 Chlamydomonas reinhardtii
Cre16.g690750 1.0kb upstream 1.0kb upstream 7562 true chromosome_16: 772934-780495 Chlamydomonas reinhardtii
Cre16.g690750 1.0kb upstream 1.0kb upstream 1000 false chromosome_16: 772934-773933 Chlamydomonas reinhardtii
Cre16.g690750 1.0kb downstream 1.0kb downstream 7562 true chromosome_16: 773934-781495 Chlamydomonas reinhardtii
Cre16.g690750 1.0kb downstream 1.0kb downstream 1000 false chromosome_16: 780496-781495 Chlamydomonas reinhardtii
Cre16.g690750 2.0kb upstream 2.0kb upstream 8562 true chromosome_16: 771934-780495 Chlamydomonas reinhardtii
Cre16.g690750 2.0kb upstream 2.0kb upstream 2000 false chromosome_16: 771934-773933 Chlamydomonas reinhardtii
Cre16.g690750 2.0kb downstream 2.0kb downstream 8562 true chromosome_16: 773934-782495 Chlamydomonas reinhardtii
Cre16.g690750 2.0kb downstream 2.0kb downstream 2000 false chromosome_16: 780496-782495 Chlamydomonas reinhardtii
Cre16.g690750 5.0kb upstream 5.0kb upstream 11562 true chromosome_16: 768934-780495 Chlamydomonas reinhardtii
Cre16.g690750 5.0kb upstream 5.0kb upstream 5000 false chromosome_16: 768934-773933 Chlamydomonas reinhardtii
Cre16.g690750 5.0kb downstream 5.0kb downstream 11562 true chromosome_16: 773934-785495 Chlamydomonas reinhardtii
Cre16.g690750 5.0kb downstream 5.0kb downstream 5000 false chromosome_16: 780496-785495 Chlamydomonas reinhardtii
Cre16.g690750 10.0kb upstream 10.0kb upstream 16562 true chromosome_16: 763934-780495 Chlamydomonas reinhardtii
Cre16.g690750 10.0kb upstream 10.0kb upstream 10000 false chromosome_16: 763934-773933 Chlamydomonas reinhardtii
Cre16.g690750 10.0kb downstream 10.0kb downstream 16562 true chromosome_16: 773934-790495 Chlamydomonas reinhardtii
Cre16.g690750 10.0kb downstream 10.0kb downstream 10000 false chromosome_16: 780496-790495 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124078241 5260 Chlorophyte View MSA
123396184 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.077     Low Low
cufflinks 0.71        
cufflinks 0.74        
cufflinks 0.567        
cufflinks 0.392        
cufflinks 0.575        
cufflinks 0.927       High
cufflinks 0.606        
cufflinks 0.109       Low
cufflinks 0.209        
cufflinks 0.499        
cufflinks 0.583        
cufflinks 0.394        
cufflinks 0.901       High
cufflinks 0.345        
cufflinks 0.223        
cufflinks 0.424        
cufflinks 0.684        
cufflinks 0.2       Low
cufflinks 1.376       High
cufflinks 0.28        
cufflinks 0.185       Low
cufflinks 0.965       High
cufflinks 0.442        
cufflinks 0.247        
cufflinks 2.58011 0.00917946 5.15104    
cufflinks 2.4633 0.0 4.97191    
cufflinks 1.64372 0.0 4.04764    
cufflinks 3.98586 0.0 8.17032   High
cufflinks 7.92848 0.334458 15.5225    

0 Strain