Gene : MMP6 C. reinhardtii v5.6
Primary Identifier:  ? Cre16.g692200 Defline:  (1 of 37) 3.4.24.38 - Gametolysin / Lysin
Genomic Order:  91 Name:  ? Cre16.g692200
Secondary Identifier:  ? PAC:30777524
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre16.g692200 0.5kb upstream 0.5kb upstream 8502 true chromosome_16: 601258-609759 Chlamydomonas reinhardtii
Cre16.g692200 0.5kb upstream 0.5kb upstream 500 false chromosome_16: 601258-601757 Chlamydomonas reinhardtii
Cre16.g692200 0.5kb downstream 0.5kb downstream 8502 true chromosome_16: 601758-610259 Chlamydomonas reinhardtii
Cre16.g692200 0.5kb downstream 0.5kb downstream 500 false chromosome_16: 609760-610259 Chlamydomonas reinhardtii
Cre16.g692200 1.0kb upstream 1.0kb upstream 9002 true chromosome_16: 600758-609759 Chlamydomonas reinhardtii
Cre16.g692200 1.0kb upstream 1.0kb upstream 1000 false chromosome_16: 600758-601757 Chlamydomonas reinhardtii
Cre16.g692200 1.0kb downstream 1.0kb downstream 9002 true chromosome_16: 601758-610759 Chlamydomonas reinhardtii
Cre16.g692200 1.0kb downstream 1.0kb downstream 1000 false chromosome_16: 609760-610759 Chlamydomonas reinhardtii
Cre16.g692200 2.0kb upstream 2.0kb upstream 10002 true chromosome_16: 599758-609759 Chlamydomonas reinhardtii
Cre16.g692200 2.0kb upstream 2.0kb upstream 2000 false chromosome_16: 599758-601757 Chlamydomonas reinhardtii
Cre16.g692200 2.0kb downstream 2.0kb downstream 10002 true chromosome_16: 601758-611759 Chlamydomonas reinhardtii
Cre16.g692200 2.0kb downstream 2.0kb downstream 2000 false chromosome_16: 609760-611759 Chlamydomonas reinhardtii
Cre16.g692200 5.0kb upstream 5.0kb upstream 13002 true chromosome_16: 596758-609759 Chlamydomonas reinhardtii
Cre16.g692200 5.0kb upstream 5.0kb upstream 5000 false chromosome_16: 596758-601757 Chlamydomonas reinhardtii
Cre16.g692200 5.0kb downstream 5.0kb downstream 13002 true chromosome_16: 601758-614759 Chlamydomonas reinhardtii
Cre16.g692200 5.0kb downstream 5.0kb downstream 5000 false chromosome_16: 609760-614759 Chlamydomonas reinhardtii
Cre16.g692200 10.0kb upstream 10.0kb upstream 18002 true chromosome_16: 591758-609759 Chlamydomonas reinhardtii
Cre16.g692200 10.0kb upstream 10.0kb upstream 10000 false chromosome_16: 591758-601757 Chlamydomonas reinhardtii
Cre16.g692200 10.0kb downstream 10.0kb downstream 18002 true chromosome_16: 601758-619759 Chlamydomonas reinhardtii
Cre16.g692200 10.0kb downstream 10.0kb downstream 10000 false chromosome_16: 609760-619759 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124094274 5260 Chlorophyte View MSA
123411159 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.634        
cufflinks 0.443        
cufflinks 0.448        
cufflinks 1.533       High
cufflinks 4.628       High
cufflinks 0.205        
cufflinks 0.404        
cufflinks 0.235        
cufflinks 1.292        
cufflinks 0.492        
cufflinks 0.181       Low
cufflinks 6.562       High
cufflinks 0.699        
cufflinks 0.19       Low
cufflinks 0.574        
cufflinks 0.592        
cufflinks 0.396        
cufflinks 0.525        
cufflinks 0.878        
cufflinks 0.069     Low Low
cufflinks 0.745        
cufflinks 0.294        
cufflinks 0.26        
cufflinks 0.884        
cufflinks 0.199        
cufflinks 1.42181 0.115408 2.72821   High
cufflinks 3.51823 0.469333 6.56713    
cufflinks 10.6275 0.0 21.3567   High
cufflinks 7.26013 0.956927 13.5633   High
cufflinks 6.73919 1.35238 12.126   Low

0 Strain