Gene : Cre17.g696300 C. reinhardtii v5.6
Defline:  (1 of 1) PTHR12360:SF1 - NF-X1-TYPE ZINC FINGER PROTEIN NFXL1 Genomic Order:  5
Name:  ? Cre17.g696300 Secondary Identifier:  ? PAC:30781614
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre17.g696300 0.5kb upstream 0.5kb upstream 9327 true chromosome_17: 27349-36675 Chlamydomonas reinhardtii
Cre17.g696300 0.5kb upstream 0.5kb upstream 500 false chromosome_17: 36176-36675 Chlamydomonas reinhardtii
Cre17.g696300 0.5kb downstream 0.5kb downstream 9327 true chromosome_17: 26849-36175 Chlamydomonas reinhardtii
Cre17.g696300 0.5kb downstream 0.5kb downstream 500 false chromosome_17: 26849-27348 Chlamydomonas reinhardtii
Cre17.g696300 1.0kb upstream 1.0kb upstream 9827 true chromosome_17: 27349-37175 Chlamydomonas reinhardtii
Cre17.g696300 1.0kb upstream 1.0kb upstream 1000 false chromosome_17: 36176-37175 Chlamydomonas reinhardtii
Cre17.g696300 1.0kb downstream 1.0kb downstream 9827 true chromosome_17: 26349-36175 Chlamydomonas reinhardtii
Cre17.g696300 1.0kb downstream 1.0kb downstream 1000 false chromosome_17: 26349-27348 Chlamydomonas reinhardtii
Cre17.g696300 2.0kb upstream 2.0kb upstream 10827 true chromosome_17: 27349-38175 Chlamydomonas reinhardtii
Cre17.g696300 2.0kb upstream 2.0kb upstream 2000 false chromosome_17: 36176-38175 Chlamydomonas reinhardtii
Cre17.g696300 2.0kb downstream 2.0kb downstream 10827 true chromosome_17: 25349-36175 Chlamydomonas reinhardtii
Cre17.g696300 2.0kb downstream 2.0kb downstream 2000 false chromosome_17: 25349-27348 Chlamydomonas reinhardtii
Cre17.g696300 5.0kb upstream 5.0kb upstream 13827 true chromosome_17: 27349-41175 Chlamydomonas reinhardtii
Cre17.g696300 5.0kb upstream 5.0kb upstream 5000 false chromosome_17: 36176-41175 Chlamydomonas reinhardtii
Cre17.g696300 5.0kb downstream 5.0kb downstream 13827 true chromosome_17: 22349-36175 Chlamydomonas reinhardtii
Cre17.g696300 5.0kb downstream 5.0kb downstream 5000 false chromosome_17: 22349-27348 Chlamydomonas reinhardtii
Cre17.g696300 10.0kb upstream 10.0kb upstream 18827 true chromosome_17: 27349-46175 Chlamydomonas reinhardtii
Cre17.g696300 10.0kb upstream 10.0kb upstream 10000 false chromosome_17: 36176-46175 Chlamydomonas reinhardtii
Cre17.g696300 10.0kb downstream 10.0kb downstream 18827 true chromosome_17: 17349-36175 Chlamydomonas reinhardtii
Cre17.g696300 10.0kb downstream 10.0kb downstream 10000 false chromosome_17: 17349-27348 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124098302 5260 Chlorophyte View MSA
123428352 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.913        
cufflinks 2.157        
cufflinks 2.427       High
cufflinks 1.715        
cufflinks 2.432       High
cufflinks 1.807        
cufflinks 1.779        
cufflinks 2.197        
cufflinks 1.86        
cufflinks 1.013       Low
cufflinks 1.314        
cufflinks 1.959        
cufflinks 2.487       High
cufflinks 1.976        
cufflinks 1.408        
cufflinks 1.893        
cufflinks 1.813        
cufflinks 2.421       High
cufflinks 0.528       Low
cufflinks 1.536        
cufflinks 1.713        
cufflinks 1.659        
cufflinks 1.419        
cufflinks 1.979        
cufflinks 1.704        
cufflinks 23.8414 0.0 48.161   Low
cufflinks 9.51327 2.58676 16.4398   High
cufflinks 2.30272 0.0 4.84193   Low
cufflinks 3.30006 0.546118 6.05401   Low
cufflinks 3.5348 0.681115 6.38848    

0 Strain