Gene : Cre17.g697500 C. reinhardtii v5.6
Defline:  (1 of 1) KOG0027//KOG4070 - Calmodulin and related proteins (EF-Hand superfamily) // Putative signal transduction protein p25 Genomic Order:  30
Name:  ? Cre17.g697500 Secondary Identifier:  ? PAC:30781851
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre17.g697500 0.5kb upstream 0.5kb upstream 6588 true chromosome_17: 186960-193547 Chlamydomonas reinhardtii
Cre17.g697500 0.5kb upstream 0.5kb upstream 500 false chromosome_17: 186960-187459 Chlamydomonas reinhardtii
Cre17.g697500 0.5kb downstream 0.5kb downstream 6588 true chromosome_17: 187460-194047 Chlamydomonas reinhardtii
Cre17.g697500 0.5kb downstream 0.5kb downstream 500 false chromosome_17: 193548-194047 Chlamydomonas reinhardtii
Cre17.g697500 1.0kb upstream 1.0kb upstream 7088 true chromosome_17: 186460-193547 Chlamydomonas reinhardtii
Cre17.g697500 1.0kb upstream 1.0kb upstream 1000 false chromosome_17: 186460-187459 Chlamydomonas reinhardtii
Cre17.g697500 1.0kb downstream 1.0kb downstream 7088 true chromosome_17: 187460-194547 Chlamydomonas reinhardtii
Cre17.g697500 1.0kb downstream 1.0kb downstream 1000 false chromosome_17: 193548-194547 Chlamydomonas reinhardtii
Cre17.g697500 2.0kb upstream 2.0kb upstream 8088 true chromosome_17: 185460-193547 Chlamydomonas reinhardtii
Cre17.g697500 2.0kb upstream 2.0kb upstream 2000 false chromosome_17: 185460-187459 Chlamydomonas reinhardtii
Cre17.g697500 2.0kb downstream 2.0kb downstream 8088 true chromosome_17: 187460-195547 Chlamydomonas reinhardtii
Cre17.g697500 2.0kb downstream 2.0kb downstream 2000 false chromosome_17: 193548-195547 Chlamydomonas reinhardtii
Cre17.g697500 5.0kb upstream 5.0kb upstream 11088 true chromosome_17: 182460-193547 Chlamydomonas reinhardtii
Cre17.g697500 5.0kb upstream 5.0kb upstream 5000 false chromosome_17: 182460-187459 Chlamydomonas reinhardtii
Cre17.g697500 5.0kb downstream 5.0kb downstream 11088 true chromosome_17: 187460-198547 Chlamydomonas reinhardtii
Cre17.g697500 5.0kb downstream 5.0kb downstream 5000 false chromosome_17: 193548-198547 Chlamydomonas reinhardtii
Cre17.g697500 10.0kb upstream 10.0kb upstream 16088 true chromosome_17: 177460-193547 Chlamydomonas reinhardtii
Cre17.g697500 10.0kb upstream 10.0kb upstream 10000 false chromosome_17: 177460-187459 Chlamydomonas reinhardtii
Cre17.g697500 10.0kb downstream 10.0kb downstream 16088 true chromosome_17: 187460-203547 Chlamydomonas reinhardtii
Cre17.g697500 10.0kb downstream 10.0kb downstream 10000 false chromosome_17: 193548-203547 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124111494 5260 Chlorophyte View MSA
123423279 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.005     Low Low
cufflinks 1.47        
cufflinks 1.657        
cufflinks 1.627        
cufflinks 0.647        
cufflinks 1.085        
cufflinks 2.162        
cufflinks 2.077        
cufflinks 0.073     Low Low
cufflinks 0.24        
cufflinks 1.299        
cufflinks 2.247        
cufflinks 0.526        
cufflinks 0.97        
cufflinks 2.071        
cufflinks 0.018     Low Low
cufflinks 0.06     Low Low
cufflinks 1.049        
cufflinks 0.696        
cufflinks 1.023        
cufflinks 0.595        
cufflinks 0.157        
cufflinks 7.838       High
cufflinks 0.882        
cufflinks 0.104     Low  
cufflinks 3.28598 0.522587 6.04938   Low
cufflinks 3.42329 0.276988 6.56959    
cufflinks 5.57828 0.0 11.483    
cufflinks 5.90953 0.955576 10.8635    
cufflinks 14.0234 2.63238 25.4143   High

0 Strain