Gene : CGL22 C. reinhardtii v5.6
Primary Identifier:  ? Cre17.g700300 Defline:  (1 of 1) KOG0730 - AAA+-type ATPase
Genomic Order:  97 Name:  ? Cre17.g700300
Secondary Identifier:  ? PAC:30781628
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre17.g700300 0.5kb upstream 0.5kb upstream 5896 true chromosome_17: 631401-637296 Chlamydomonas reinhardtii
Cre17.g700300 0.5kb upstream 0.5kb upstream 500 false chromosome_17: 636797-637296 Chlamydomonas reinhardtii
Cre17.g700300 0.5kb downstream 0.5kb downstream 5896 true chromosome_17: 630901-636796 Chlamydomonas reinhardtii
Cre17.g700300 0.5kb downstream 0.5kb downstream 500 false chromosome_17: 630901-631400 Chlamydomonas reinhardtii
Cre17.g700300 1.0kb upstream 1.0kb upstream 6396 true chromosome_17: 631401-637796 Chlamydomonas reinhardtii
Cre17.g700300 1.0kb upstream 1.0kb upstream 1000 false chromosome_17: 636797-637796 Chlamydomonas reinhardtii
Cre17.g700300 1.0kb downstream 1.0kb downstream 6396 true chromosome_17: 630401-636796 Chlamydomonas reinhardtii
Cre17.g700300 1.0kb downstream 1.0kb downstream 1000 false chromosome_17: 630401-631400 Chlamydomonas reinhardtii
Cre17.g700300 2.0kb upstream 2.0kb upstream 7396 true chromosome_17: 631401-638796 Chlamydomonas reinhardtii
Cre17.g700300 2.0kb upstream 2.0kb upstream 2000 false chromosome_17: 636797-638796 Chlamydomonas reinhardtii
Cre17.g700300 2.0kb downstream 2.0kb downstream 7396 true chromosome_17: 629401-636796 Chlamydomonas reinhardtii
Cre17.g700300 2.0kb downstream 2.0kb downstream 2000 false chromosome_17: 629401-631400 Chlamydomonas reinhardtii
Cre17.g700300 5.0kb upstream 5.0kb upstream 10396 true chromosome_17: 631401-641796 Chlamydomonas reinhardtii
Cre17.g700300 5.0kb upstream 5.0kb upstream 5000 false chromosome_17: 636797-641796 Chlamydomonas reinhardtii
Cre17.g700300 5.0kb downstream 5.0kb downstream 10396 true chromosome_17: 626401-636796 Chlamydomonas reinhardtii
Cre17.g700300 5.0kb downstream 5.0kb downstream 5000 false chromosome_17: 626401-631400 Chlamydomonas reinhardtii
Cre17.g700300 10.0kb upstream 10.0kb upstream 15396 true chromosome_17: 631401-646796 Chlamydomonas reinhardtii
Cre17.g700300 10.0kb upstream 10.0kb upstream 10000 false chromosome_17: 636797-646796 Chlamydomonas reinhardtii
Cre17.g700300 10.0kb downstream 10.0kb downstream 15396 true chromosome_17: 621401-636796 Chlamydomonas reinhardtii
Cre17.g700300 10.0kb downstream 10.0kb downstream 10000 false chromosome_17: 621401-631400 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124112604 5260 Chlorophyte View MSA
123426108 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.926        
cufflinks 1.435        
cufflinks 0.879        
cufflinks 1.253        
cufflinks 0.931        
cufflinks 1.008        
cufflinks 1.218        
cufflinks 1.532       High
cufflinks 1.116        
cufflinks 0.44       Low
cufflinks 1.161        
cufflinks 1.286        
cufflinks 0.965        
cufflinks 0.961        
cufflinks 0.989        
cufflinks 1.103        
cufflinks 0.788        
cufflinks 1.036        
cufflinks 0.208       Low
cufflinks 0.809        
cufflinks 1.085        
cufflinks 1.134        
cufflinks 0.801        
cufflinks 1.726       High
cufflinks 0.867        
cufflinks 3.19943 0.429175 5.96968   High
cufflinks 7.2305 1.75541 12.7056    
cufflinks 1.57503 0.0 3.7794    
cufflinks 2.00034 0.153952 3.84673    
cufflinks 4.23595 0.583187 7.88872   High

0 Strain