Gene : Cre17.g742200 C. reinhardtii v5.6
Defline:  (1 of 1) PTHR22870//PTHR22870:SF220 - REGULATOR OF CHROMOSOME CONDENSATION // RCC1 AND BTB DOMAIN-CONTAINING PROTEIN 2 Genomic Order:  1040
Name:  ? Cre17.g742200 Secondary Identifier:  ? PAC:30782802
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre17.g742200 0.5kb upstream 0.5kb upstream 5604 true chromosome_17: 6231862-6237465 Chlamydomonas reinhardtii
Cre17.g742200 0.5kb upstream 0.5kb upstream 500 false chromosome_17: 6236966-6237465 Chlamydomonas reinhardtii
Cre17.g742200 0.5kb downstream 0.5kb downstream 5604 true chromosome_17: 6231362-6236965 Chlamydomonas reinhardtii
Cre17.g742200 0.5kb downstream 0.5kb downstream 500 false chromosome_17: 6231362-6231861 Chlamydomonas reinhardtii
Cre17.g742200 1.0kb upstream 1.0kb upstream 6104 true chromosome_17: 6231862-6237965 Chlamydomonas reinhardtii
Cre17.g742200 1.0kb upstream 1.0kb upstream 1000 false chromosome_17: 6236966-6237965 Chlamydomonas reinhardtii
Cre17.g742200 1.0kb downstream 1.0kb downstream 6104 true chromosome_17: 6230862-6236965 Chlamydomonas reinhardtii
Cre17.g742200 1.0kb downstream 1.0kb downstream 1000 false chromosome_17: 6230862-6231861 Chlamydomonas reinhardtii
Cre17.g742200 2.0kb upstream 2.0kb upstream 7104 true chromosome_17: 6231862-6238965 Chlamydomonas reinhardtii
Cre17.g742200 2.0kb upstream 2.0kb upstream 2000 false chromosome_17: 6236966-6238965 Chlamydomonas reinhardtii
Cre17.g742200 2.0kb downstream 2.0kb downstream 7104 true chromosome_17: 6229862-6236965 Chlamydomonas reinhardtii
Cre17.g742200 2.0kb downstream 2.0kb downstream 2000 false chromosome_17: 6229862-6231861 Chlamydomonas reinhardtii
Cre17.g742200 5.0kb upstream 5.0kb upstream 10104 true chromosome_17: 6231862-6241965 Chlamydomonas reinhardtii
Cre17.g742200 5.0kb upstream 5.0kb upstream 5000 false chromosome_17: 6236966-6241965 Chlamydomonas reinhardtii
Cre17.g742200 5.0kb downstream 5.0kb downstream 10104 true chromosome_17: 6226862-6236965 Chlamydomonas reinhardtii
Cre17.g742200 5.0kb downstream 5.0kb downstream 5000 false chromosome_17: 6226862-6231861 Chlamydomonas reinhardtii
Cre17.g742200 10.0kb upstream 10.0kb upstream 15104 true chromosome_17: 6231862-6246965 Chlamydomonas reinhardtii
Cre17.g742200 10.0kb upstream 10.0kb upstream 10000 false chromosome_17: 6236966-6246965 Chlamydomonas reinhardtii
Cre17.g742200 10.0kb downstream 10.0kb downstream 15104 true chromosome_17: 6221862-6236965 Chlamydomonas reinhardtii
Cre17.g742200 10.0kb downstream 10.0kb downstream 10000 false chromosome_17: 6221862-6231861 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124109351 5260 Chlorophyte View MSA
123425107 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.968       Low
cufflinks 28.949     High High
cufflinks 29.939     High High
cufflinks 18.415     High  
cufflinks 20.974     High  
cufflinks 19.502     High  
cufflinks 23.416     High  
cufflinks 20.004     High  
cufflinks 7.278        
cufflinks 19.094     High  
cufflinks 14.389     High  
cufflinks 13.767        
cufflinks 19.468     High  
cufflinks 25.016     High  
cufflinks 10.817        
cufflinks 7.236        
cufflinks 3.425       Low
cufflinks 24.086     High  
cufflinks 9.012     High  
cufflinks 9.202        
cufflinks 11.768        
cufflinks 2.593       Low
cufflinks 14.651     High  
cufflinks 14.455        
cufflinks 2.511       Low
cufflinks 35.5988 0.71873 70.4788 High Low
cufflinks 32.5433 8.53772 56.5489 High  
cufflinks 25.3603 0.0 51.1564    
cufflinks 40.4488 0.284882 80.6127 High  
cufflinks 55.1843 5.42317 104.945 High High

0 Strain