Gene : Cre17.g740800 C. reinhardtii v5.6
Defline:  (1 of 5) PF06742 - Protein of unknown function (DUF1214) (DUF1214) Genomic Order:  1007
Name:  ? Cre17.g740800 Secondary Identifier:  ? PAC:30781859
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre17.g740800 0.5kb upstream 0.5kb upstream 5319 true chromosome_17: 6015956-6021274 Chlamydomonas reinhardtii
Cre17.g740800 0.5kb upstream 0.5kb upstream 500 false chromosome_17: 6015956-6016455 Chlamydomonas reinhardtii
Cre17.g740800 0.5kb downstream 0.5kb downstream 5319 true chromosome_17: 6016456-6021774 Chlamydomonas reinhardtii
Cre17.g740800 0.5kb downstream 0.5kb downstream 500 false chromosome_17: 6021275-6021774 Chlamydomonas reinhardtii
Cre17.g740800 1.0kb upstream 1.0kb upstream 5819 true chromosome_17: 6015456-6021274 Chlamydomonas reinhardtii
Cre17.g740800 1.0kb upstream 1.0kb upstream 1000 false chromosome_17: 6015456-6016455 Chlamydomonas reinhardtii
Cre17.g740800 1.0kb downstream 1.0kb downstream 5819 true chromosome_17: 6016456-6022274 Chlamydomonas reinhardtii
Cre17.g740800 1.0kb downstream 1.0kb downstream 1000 false chromosome_17: 6021275-6022274 Chlamydomonas reinhardtii
Cre17.g740800 2.0kb upstream 2.0kb upstream 6819 true chromosome_17: 6014456-6021274 Chlamydomonas reinhardtii
Cre17.g740800 2.0kb upstream 2.0kb upstream 2000 false chromosome_17: 6014456-6016455 Chlamydomonas reinhardtii
Cre17.g740800 2.0kb downstream 2.0kb downstream 6819 true chromosome_17: 6016456-6023274 Chlamydomonas reinhardtii
Cre17.g740800 2.0kb downstream 2.0kb downstream 2000 false chromosome_17: 6021275-6023274 Chlamydomonas reinhardtii
Cre17.g740800 5.0kb upstream 5.0kb upstream 9819 true chromosome_17: 6011456-6021274 Chlamydomonas reinhardtii
Cre17.g740800 5.0kb upstream 5.0kb upstream 5000 false chromosome_17: 6011456-6016455 Chlamydomonas reinhardtii
Cre17.g740800 5.0kb downstream 5.0kb downstream 9819 true chromosome_17: 6016456-6026274 Chlamydomonas reinhardtii
Cre17.g740800 5.0kb downstream 5.0kb downstream 5000 false chromosome_17: 6021275-6026274 Chlamydomonas reinhardtii
Cre17.g740800 10.0kb upstream 10.0kb upstream 14819 true chromosome_17: 6006456-6021274 Chlamydomonas reinhardtii
Cre17.g740800 10.0kb upstream 10.0kb upstream 10000 false chromosome_17: 6006456-6016455 Chlamydomonas reinhardtii
Cre17.g740800 10.0kb downstream 10.0kb downstream 14819 true chromosome_17: 6016456-6031274 Chlamydomonas reinhardtii
Cre17.g740800 10.0kb downstream 10.0kb downstream 10000 false chromosome_17: 6021275-6031274 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124081701 5260 Chlorophyte View MSA
123399415 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.037     Low  
cufflinks 0.121     Low  
cufflinks 0.096     Low  
cufflinks 0.068     Low  
cufflinks 0.226       High
cufflinks 0.195       High
cufflinks 0.115     Low  
cufflinks 0.167     Low  
cufflinks 0.009     Low Low
cufflinks 0.048     Low  
cufflinks 0.041     Low  
cufflinks 0.012     Low Low
cufflinks 0.14        
cufflinks 0.337       High
cufflinks 0.013     Low Low
cufflinks 0.031     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.35       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.022     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.021     Low  
cufflinks 0.033     Low  
cufflinks 0.017     Low Low
cufflinks 10.0527 1.4842 18.6212 Low High
cufflinks 1.04306 0.0 2.44765    
cufflinks 0.253284 0.0 0.831796 Low Low
cufflinks 0.0291083 0.0 0.0902594 Low Low
cufflinks 1.1081 0.0 2.3596   High

0 Strain