Gene : PHC28 C. reinhardtii v5.6
Primary Identifier:  ? Cre17.g717950 Defline:  (1 of 70) PF12499 - Pherophorin (DUF3707)
Genomic Order:  484 Name:  ? Cre17.g717950
Secondary Identifier:  ? PAC:30781683
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre17.g717950 0.5kb upstream 0.5kb upstream 4620 true chromosome_17: 2698091-2702710 Chlamydomonas reinhardtii
Cre17.g717950 0.5kb upstream 0.5kb upstream 500 false chromosome_17: 2702211-2702710 Chlamydomonas reinhardtii
Cre17.g717950 0.5kb downstream 0.5kb downstream 4620 true chromosome_17: 2697591-2702210 Chlamydomonas reinhardtii
Cre17.g717950 0.5kb downstream 0.5kb downstream 500 false chromosome_17: 2697591-2698090 Chlamydomonas reinhardtii
Cre17.g717950 1.0kb upstream 1.0kb upstream 5120 true chromosome_17: 2698091-2703210 Chlamydomonas reinhardtii
Cre17.g717950 1.0kb upstream 1.0kb upstream 1000 false chromosome_17: 2702211-2703210 Chlamydomonas reinhardtii
Cre17.g717950 1.0kb downstream 1.0kb downstream 5120 true chromosome_17: 2697091-2702210 Chlamydomonas reinhardtii
Cre17.g717950 1.0kb downstream 1.0kb downstream 1000 false chromosome_17: 2697091-2698090 Chlamydomonas reinhardtii
Cre17.g717950 2.0kb upstream 2.0kb upstream 6120 true chromosome_17: 2698091-2704210 Chlamydomonas reinhardtii
Cre17.g717950 2.0kb upstream 2.0kb upstream 2000 false chromosome_17: 2702211-2704210 Chlamydomonas reinhardtii
Cre17.g717950 2.0kb downstream 2.0kb downstream 6120 true chromosome_17: 2696091-2702210 Chlamydomonas reinhardtii
Cre17.g717950 2.0kb downstream 2.0kb downstream 2000 false chromosome_17: 2696091-2698090 Chlamydomonas reinhardtii
Cre17.g717950 5.0kb upstream 5.0kb upstream 9120 true chromosome_17: 2698091-2707210 Chlamydomonas reinhardtii
Cre17.g717950 5.0kb upstream 5.0kb upstream 5000 false chromosome_17: 2702211-2707210 Chlamydomonas reinhardtii
Cre17.g717950 5.0kb downstream 5.0kb downstream 9120 true chromosome_17: 2693091-2702210 Chlamydomonas reinhardtii
Cre17.g717950 5.0kb downstream 5.0kb downstream 5000 false chromosome_17: 2693091-2698090 Chlamydomonas reinhardtii
Cre17.g717950 10.0kb upstream 10.0kb upstream 14120 true chromosome_17: 2698091-2712210 Chlamydomonas reinhardtii
Cre17.g717950 10.0kb upstream 10.0kb upstream 10000 false chromosome_17: 2702211-2712210 Chlamydomonas reinhardtii
Cre17.g717950 10.0kb downstream 10.0kb downstream 14120 true chromosome_17: 2688091-2702210 Chlamydomonas reinhardtii
Cre17.g717950 10.0kb downstream 10.0kb downstream 10000 false chromosome_17: 2688091-2698090 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124086577 5260 Chlorophyte View MSA
123403906 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.638        
cufflinks 1.152        
cufflinks 3.923        
cufflinks 6.489       High
cufflinks 1.093        
cufflinks 1.704        
cufflinks 0.668        
cufflinks 0.881        
cufflinks 0.33        
cufflinks 0.612        
cufflinks 5.643       High
cufflinks 2.369        
cufflinks 1.04        
cufflinks 5.119       High
cufflinks 0.649        
cufflinks 1.093        
cufflinks 0.995        
cufflinks 4.297       High
cufflinks 0.006     Low Low
cufflinks 0.381        
cufflinks 1.82        
cufflinks 0.231        
cufflinks 3.331        
cufflinks 0.184     Low Low
cufflinks 0.215        
cufflinks 31.5708 0.0 63.4289 High Low
cufflinks 11.9204 3.22166 20.6192    
cufflinks 27.0538 0.0 56.164 High  
cufflinks 12.4876 1.03833 23.9369   Low
cufflinks 293.136 0.0 644.892 High  

0 Strain