Gene : Cre17.g717800 C. reinhardtii v5.6
Defline:  (1 of 1) K14309 - nuclear pore complex protein Nup93 (NUP93, NIC96) Genomic Order:  480
Name:  ? Cre17.g717800 Secondary Identifier:  ? PAC:30782058
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre17.g717800 0.5kb upstream 0.5kb upstream 10032 true chromosome_17: 2672501-2682532 Chlamydomonas reinhardtii
Cre17.g717800 0.5kb upstream 0.5kb upstream 500 false chromosome_17: 2672501-2673000 Chlamydomonas reinhardtii
Cre17.g717800 0.5kb downstream 0.5kb downstream 10032 true chromosome_17: 2673001-2683032 Chlamydomonas reinhardtii
Cre17.g717800 0.5kb downstream 0.5kb downstream 500 false chromosome_17: 2682533-2683032 Chlamydomonas reinhardtii
Cre17.g717800 1.0kb upstream 1.0kb upstream 10532 true chromosome_17: 2672001-2682532 Chlamydomonas reinhardtii
Cre17.g717800 1.0kb upstream 1.0kb upstream 1000 false chromosome_17: 2672001-2673000 Chlamydomonas reinhardtii
Cre17.g717800 1.0kb downstream 1.0kb downstream 10532 true chromosome_17: 2673001-2683532 Chlamydomonas reinhardtii
Cre17.g717800 1.0kb downstream 1.0kb downstream 1000 false chromosome_17: 2682533-2683532 Chlamydomonas reinhardtii
Cre17.g717800 2.0kb upstream 2.0kb upstream 11532 true chromosome_17: 2671001-2682532 Chlamydomonas reinhardtii
Cre17.g717800 2.0kb upstream 2.0kb upstream 2000 false chromosome_17: 2671001-2673000 Chlamydomonas reinhardtii
Cre17.g717800 2.0kb downstream 2.0kb downstream 11532 true chromosome_17: 2673001-2684532 Chlamydomonas reinhardtii
Cre17.g717800 2.0kb downstream 2.0kb downstream 2000 false chromosome_17: 2682533-2684532 Chlamydomonas reinhardtii
Cre17.g717800 5.0kb upstream 5.0kb upstream 14532 true chromosome_17: 2668001-2682532 Chlamydomonas reinhardtii
Cre17.g717800 5.0kb upstream 5.0kb upstream 5000 false chromosome_17: 2668001-2673000 Chlamydomonas reinhardtii
Cre17.g717800 5.0kb downstream 5.0kb downstream 14532 true chromosome_17: 2673001-2687532 Chlamydomonas reinhardtii
Cre17.g717800 5.0kb downstream 5.0kb downstream 5000 false chromosome_17: 2682533-2687532 Chlamydomonas reinhardtii
Cre17.g717800 10.0kb upstream 10.0kb upstream 19532 true chromosome_17: 2663001-2682532 Chlamydomonas reinhardtii
Cre17.g717800 10.0kb upstream 10.0kb upstream 10000 false chromosome_17: 2663001-2673000 Chlamydomonas reinhardtii
Cre17.g717800 10.0kb downstream 10.0kb downstream 19532 true chromosome_17: 2673001-2692532 Chlamydomonas reinhardtii
Cre17.g717800 10.0kb downstream 10.0kb downstream 10000 false chromosome_17: 2682533-2692532 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124097822 5260 Chlorophyte View MSA
123424897 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.856        
cufflinks 1.977       High
cufflinks 1.214        
cufflinks 1.051        
cufflinks 1.382        
cufflinks 1.158        
cufflinks 1.821       High
cufflinks 1.592       High
cufflinks 1.04        
cufflinks 0.343       Low
cufflinks 0.782        
cufflinks 1.027        
cufflinks 0.655        
cufflinks 1.179        
cufflinks 0.811        
cufflinks 0.881        
cufflinks 0.332       Low
cufflinks 1.074        
cufflinks 0.51        
cufflinks 0.779        
cufflinks 0.835        
cufflinks 0.261       Low
cufflinks 0.941        
cufflinks 1.03        
cufflinks 0.26       Low
cufflinks 7.73365 1.13768 14.3296   Low
cufflinks 22.552 5.9881 39.1159   High
cufflinks 4.09032 0.0 8.69323    
cufflinks 6.54113 1.05556 12.0267   Low
cufflinks 8.31283 1.65727 14.9684    

0 Strain