Gene : MINE1 C. reinhardtii v5.6
Primary Identifier:  ? Cre17.g720350 Defline:  (1 of 1) PTHR33404//PTHR33404:SF2 - FAMILY NOT NAMED // CELL DIVISION TOPOLOGICAL SPECIFICITY FACTOR HOMOLOG, CHLOROPLASTIC
Genomic Order:  541 Name:  ? Cre17.g720350
Secondary Identifier:  ? PAC:30782341
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre17.g720350 0.5kb upstream 0.5kb upstream 2093 true chromosome_17: 2997084-2999176 Chlamydomonas reinhardtii
Cre17.g720350 0.5kb upstream 0.5kb upstream 500 false chromosome_17: 2998677-2999176 Chlamydomonas reinhardtii
Cre17.g720350 0.5kb downstream 0.5kb downstream 2093 true chromosome_17: 2996584-2998676 Chlamydomonas reinhardtii
Cre17.g720350 0.5kb downstream 0.5kb downstream 500 false chromosome_17: 2996584-2997083 Chlamydomonas reinhardtii
Cre17.g720350 1.0kb upstream 1.0kb upstream 2593 true chromosome_17: 2997084-2999676 Chlamydomonas reinhardtii
Cre17.g720350 1.0kb upstream 1.0kb upstream 1000 false chromosome_17: 2998677-2999676 Chlamydomonas reinhardtii
Cre17.g720350 1.0kb downstream 1.0kb downstream 2593 true chromosome_17: 2996084-2998676 Chlamydomonas reinhardtii
Cre17.g720350 1.0kb downstream 1.0kb downstream 1000 false chromosome_17: 2996084-2997083 Chlamydomonas reinhardtii
Cre17.g720350 2.0kb upstream 2.0kb upstream 3593 true chromosome_17: 2997084-3000676 Chlamydomonas reinhardtii
Cre17.g720350 2.0kb upstream 2.0kb upstream 2000 false chromosome_17: 2998677-3000676 Chlamydomonas reinhardtii
Cre17.g720350 2.0kb downstream 2.0kb downstream 3593 true chromosome_17: 2995084-2998676 Chlamydomonas reinhardtii
Cre17.g720350 2.0kb downstream 2.0kb downstream 2000 false chromosome_17: 2995084-2997083 Chlamydomonas reinhardtii
Cre17.g720350 5.0kb upstream 5.0kb upstream 6593 true chromosome_17: 2997084-3003676 Chlamydomonas reinhardtii
Cre17.g720350 5.0kb upstream 5.0kb upstream 5000 false chromosome_17: 2998677-3003676 Chlamydomonas reinhardtii
Cre17.g720350 5.0kb downstream 5.0kb downstream 6593 true chromosome_17: 2992084-2998676 Chlamydomonas reinhardtii
Cre17.g720350 5.0kb downstream 5.0kb downstream 5000 false chromosome_17: 2992084-2997083 Chlamydomonas reinhardtii
Cre17.g720350 10.0kb upstream 10.0kb upstream 11593 true chromosome_17: 2997084-3008676 Chlamydomonas reinhardtii
Cre17.g720350 10.0kb upstream 10.0kb upstream 10000 false chromosome_17: 2998677-3008676 Chlamydomonas reinhardtii
Cre17.g720350 10.0kb downstream 10.0kb downstream 11593 true chromosome_17: 2987084-2998676 Chlamydomonas reinhardtii
Cre17.g720350 10.0kb downstream 10.0kb downstream 10000 false chromosome_17: 2987084-2997083 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124111813 5260 Chlorophyte View MSA
123428321 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.574        
cufflinks 0.078     Low Low
cufflinks 26.959     High  
cufflinks 44.675     High  
cufflinks 28.599     High  
cufflinks 11.255        
cufflinks 20.601     High  
cufflinks 22.852     High  
cufflinks 33.029     High  
cufflinks 0.036     Low Low
cufflinks 2.513        
cufflinks 18.951     High  
cufflinks 21.535     High  
cufflinks 16.531     High  
cufflinks 20.368     High  
cufflinks 20.826     High  
cufflinks 0.119     Low Low
cufflinks 0.01     Low Low
cufflinks 20.258     High  
cufflinks 0.014     Low Low
cufflinks 5.235        
cufflinks 0.007     Low Low
cufflinks 81.36     High High
cufflinks 14.378        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 6.9043 1.04524 12.7634   Low
cufflinks 5.70282 0.553124 10.8525    
cufflinks 17.9769 0.0 36.1755    
cufflinks 13.4002 2.12909 24.6713    
cufflinks 18.812 3.77866 33.8453    

0 Strain